Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455266
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Entry
135455266 CDS
T09958
Symbol
NUP85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
135455266 (NUP85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135455266 (NUP85)
03036 Chromosome and associated proteins [BR:
zle03036
]
135455266 (NUP85)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
135455266 (NUP85)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
135455266 (NUP85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
135455266
NCBI-ProteinID:
XP_064584417
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All DBs
Position
18:2385324..2396548
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AA seq
651 aa
AA seq
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MDEPDTEPPLVVVPGADPSARQLCFAWGPAEVLVCETLFGRAATGDGAPSSSRVFVVRRD
QDIYIHTLRKLFNESHGIFMGLQRSEEELAGKSRKAQLVQVSKNYRSVIRACMEDMHQAA
VSTRDPALQGQYSTQVSILSAMELIWNLCEILFVEAATAGPLLLRLLDWVRLHVCDVDSM
VRQVLSSESPSKHKLFWNVVDVFVLQGRMDEARHLLSKEASANPASMNMYKILDDLMKKM
PVPSLGNTQTLTELELKWQHWHEECQRYLQDGTFASNPHMESICKILLGDEDAILEKKEL
MTTWYHFLVTRLLYSHPTVKPMELRFYAQSSMDLFLGGESSPEPLDMILMAAFEFEMHQV
IKECSIVLSNWWFVAHLTDLLDHCKLLQSHNLYFGSNMREFLLLEYASGLFSHHSLWQLG
VDYFDHCPQFGRVYLELHIERVPLSTEQKALKVLRICEQRQMHEQVRSICKIMAMKALRN
NRLGSALSWSIRAKDAAFATLISDRFLKDYCEKGCFSDLDLIDNLGPSMLLSDRLTFLGK
YREFHRLYGEKRFAEAARLLLTLMTAHIAPCSFWMTLLTDALPLLEQKEVIFSAEQTYEL
MRCLEDLTAGNPDKQKFQDDDVETTKVEMLRLALARNLARVIVKEGTVEGS
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggacgagccggacacggagccgccgctcgtggtggtgccgggcgcggacccgtcggcc
cggcagctctgcttcgcctggggccccgcggaggtgctggtgtgcgagaccctgttcggc
cgcgcagctaccggcgatggagcaccgagctcctcccgcgtcttcgtggtccgcagggac
caggacatttacatccacaccctgcggaaactcttcaacgagtcgcacgggattttcatg
gggctgcagcggagcgaggaggagctggcggggaagtcgcggaaggcgcaattggttcaa
gtgagtaaaaactaccggtcagtgataagagcctgcatggaggacatgcaccaggcagct
gtttcgacccgggaccctgccctgcaaggccagtacagcactcaggtttccattctctct
gcaatggagctgatctggaacctgtgtgagattctgtttgtggaagcagctacagctggg
cccctcctgctgcgcctcctggactgggtgcggctgcacgtgtgcgacgtggacagcatg
gtccgccaggttctgagcagtgagagtccttccaagcacaagctcttctggaacgtggtg
gatgtctttgtgctccaaggccggatggacgaagcacggcacctgctctccaaggaagcc
agtgccaatcccgcatccatgaacatgtacaaaatcttggatgacttgatgaagaagatg
cctgtgcccagtcttggcaacacccagactctgacagagctggagctgaagtggcagcac
tggcacgaggaatgtcagcggtatctacaggatggaacttttgcttccaatccccacatg
gagtccatctgcaagatcctgctgggagatgaggatgccattttggagaagaaggagctc
atgaccacctggtatcacttcctggtcacccggctcctgtattcccaccccacggtgaag
ccgatggagctgcgcttctatgcacagtctagtatggacctgttcctgggtggagagagc
agccctgagcctctagacatgattttaatggcagcctttgaatttgagatgcatcaagtg
atcaaggaatgcagcattgtcctgagcaactggtggtttgtggctcacctgactgacctg
ttggatcactgcaaactcctgcagtctcacaatctctattttggttcaaatatgcgtgaa
ttcctcctgctggagtatgcctcaggactcttctcccatcacagcctctggcagctgggg
gtggattacttcgaccactgcccgcagttcggccgcgtgtacctggagctgcacatcgag
cgcgtcccgctcagcacggagcagaaggcgctcaaggtgctgaggatctgtgagcagagg
cagatgcatgaacaagtgcgcagcatctgtaagatcatggccatgaaggctctgcgcaac
aaccgcctgggctcggcgctgtcctggagcatccgcgccaaggacgcggcgttcgccacc
ctcatctcggacaggttcctcaaggactattgtgagaagggctgtttctctgacctggac
ctcattgacaacctgggcccgtccatgctgctcagtgaccggctcacgttccttgggaag
taccgggagttccaccggctctacggcgagaagcgcttcgcggaggcggcgcggctgctg
ctgacgctgatgacggcgcacatcgcgccctgctccttctggatgacgctgctcacggac
gcgctgccgctgctggagcagaaggaggtcatattttcagcagagcagacttacgagctg
atgcgatgcctggaagacctgacagcagggaatccagacaagcagaaattccaggatgat
gatgtggagacaaccaaagtggaaatgctgagactcgcccttgcacggaacctggctcgg
gtcatcgtcaaagagggcaccgtggaagggtcctga
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