Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455327
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Entry
135455327 CDS
T09958
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6
KO
K21988
transmembrane channel-like protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135455327 (TMC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zle02000
]
135455327 (TMC6)
03037 Cilium and associated proteins [BR:
zle03037
]
135455327 (TMC6)
Transporters [BR:
zle02000
]
Other transporters
Pores ion channels [TC:
1
]
135455327 (TMC6)
Cilium and associated proteins [BR:
zle03037
]
Other cilia and associated proteins
Stereociliary proteins
135455327 (TMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
MiaB_C
Motif
Other DBs
NCBI-GeneID:
135455327
NCBI-ProteinID:
XP_064584531
LinkDB
All DBs
Position
18:11922737..11929756
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AA seq
799 aa
AA seq
DB search
MSQPPSITLHVPEGSESDGQEPSPDNERALHTSFHQLILEQSSLIEAGLELEMQEMTRES
PAYLAVPDACAMAWPEPRQGEEHPSHSSASLQILASMPSRTIGRSLGAIISQYCNRTARL
RRRSVRPPLQQLCRTARPSLRHYDLESDPSRATLQEKRCLLVKELLSLSPSQCSHMLLTM
PLSLAEKRILRRQLSGQRGPVRPRAQRWDPFSPCAWSRVCVGLGCRGLWYRLLSLLRAAQ
PGHYALKQIGGRFGSSVLSYFLFLKTLLMLNFCSFFILLAFVVVLQAVYPAASVSPQPFT
GLELLTGAGHFTHSLLYYGYYSNATLNDPCASTPEGSVCPLPAPLLPYNLPLAYLFSVGA
SFLVTCILLVYSVSCSFRESVKSATGDLAIKVFCAWDFKVIQRRSVKLQCENICTQLKEL
LAERRSRCRSQSRGQRLRHGLVVLLAWLLALGWVSGCVLAVHYLVEHMHTVQQEQQAQGS
GRWQQEAILLVLPLVVSLLNALMPHLFNLLAMWEKQDSPVTQVSVAIFRNLILKVVILSL
LCYHWLSRSVICSTEECWETCVGQELYRFMVMDFIFTLLDTLFGELIWRLILEKRLKTKQ
RPEFDIARNVLELIYGQTLTWLGVLFAPLLPAVQMLKLLLLFYIKKTSLLRNCQSPSKPW
QASRMSTVFITLLCFPSFLGAAAFLSYTVWSMQPSETCGPFRGLETIYKSGKRWVLVLEQ
SNPNITWFAWVYQHLLENTCLLFFMSVALIAVIYFNIQVVRGRQKVICLLQEQIANEGKD
KLFLMEKLRSVYKYRGRRS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccgccctccatcaccctgcacgtccccgagggctccgagagcgatggccag
gagcccagtccggacaacgagagagccctgcacacctcgttccaccagctcatcctggag
cagagcagcttgatcgaggcaggtctggagctggagatgcaggagatgaccagagagtcc
ccagcctacctggctgttccagacgcctgtgccatggcctggccagagcccaggcaaggt
gaggagcaccccagccactcctctgcctccctgcagatcctggccagcatgcccagccgc
accatcggacgcagcctcggggccatcatctcgcagtactgcaaccgcacggcgcggctg
cggcgccggagcgtccgcccgcccctgcagcagctctgccgcacggcacggcccagcctg
cgccactacgacctggagagcgaccccagcagggccacgctgcaagagaagcggtgcctg
ctggtgaaggagctgctgagcctctcgcccagccagtgcagccacatgctgctcaccatg
cccctcagcctggcggagaaacgcatcctccggcggcagctgagcgggcagaggggcccc
gtgaggccgcgcgcccagcgctgggaccccttctcaccctgtgcgtggtccagggtctgc
gtcggcctcggctgccgaggtctctggtacaggctcctgtccctgctccgcgctgcccag
cccgggcactatgccctgaagcagattggtggccgcttcggctccagtgtcctgtcctac
ttcctctttctcaagacactccttatgttgaacttctgttcattcttcatcctgctggcc
ttcgtggtggtcctgcaggctgtgtaccccgctgcatcagtgagcccccagcccttcact
gggctggagctgctcacaggagcgggccacttcactcactcgctgctgtactacggctac
tacagcaacgccaccctgaacgacccctgcgcctccactcctgagggcagcgtgtgcccc
ctcccagcccccctgctcccctacaacctgccactggcctacctgttcagtgttggggcc
tccttccttgtcacctgcatcctgctggtgtacagcgtgtcctgctcttttcgggagagc
gtgaagagcgccacgggggacttggctatcaaggtcttctgtgcctgggacttcaaggtg
atccagaggcgctcggtgaagctgcagtgcgagaacatctgcacccagctgaaggagctg
ctggcagagcgccgctcccgctgccgctcccagagccgcggccagcgcctgcggcacggc
ctggtggtgctgctggcctggctgctggcgctgggctgggtgtcgggctgcgtgctggct
gtgcactacctcgtggagcacatgcacacggttcagcaggagcagcaagcacagggcagt
ggcagatggcagcaagaagccattctgctggtcctgccccttgtggtgtccctcctcaat
gccttgatgccccacctgttcaacctgctggccatgtgggagaagcaggactccccagtg
acacaggtctccgtggccatcttcaggaacctcatcctgaaggtggtgattctcagcctg
ctgtgctaccactggctcagccggagcgttatctgctcgacagaggagtgctgggagacg
tgtgtggggcaggagctgtatcgcttcatggtgatggatttcattttcaccctgctggac
acgctcttcggggagctcatctggaggctgattctggagaagaggctgaagacaaagcag
aggccggagtttgacatcgcccgaaatgtgctggagctgatctatgggcagaccctgacc
tggctgggcgttctcttcgctccgctcctgccagccgtgcagatgctgaagctgctgctg
ctgttctatatcaaaaagaccagcctgctgcgcaactgccagtcccccagcaagccctgg
caggcctcgcgcatgagcaccgtgttcatcactctgctgtgcttcccctccttcctgggt
gcagctgccttcctctcctacaccgtctggtcgatgcagccatcagaaacctgcggcccc
ttccgggggctggaaaccatctacaagtcagggaagaggtgggtgctagtgctggagcag
tccaaccccaacatcacctggtttgcctgggtctaccagcacctgctggagaacacatgc
ctactgttcttcatgtctgtggccctgatagctgtgatctacttcaacatccaggtggtg
agaggccgccagaaggtcatctgcctgctgcaggagcagattgccaacgaagggaaggat
aagctgttcctcatggagaagctccgctccgtgtacaagtacagaggcaggcgctcctga
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