Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455404
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Entry
135455404 CDS
T09958
Symbol
CASKIN2
Name
(RefSeq) caskin-2 isoform X1
KO
K21952
CASK-interacting protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135455404 (CASKIN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135455404 (CASKIN2)
Membrane trafficking [BR:
zle04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
135455404 (CASKIN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Caskin-Pro-rich
SAM_1
Caskin-tail
SAM_2
Ank_4
Ank_5
Ank_3
Ank_KRIT1
Caskin1-CID
SH3_2
SAM_TNK
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
135455404
NCBI-ProteinID:
XP_064584646
LinkDB
All DBs
Position
18:complement(2551898..2629155)
Genome browser
AA seq
1514 aa
AA seq
DB search
MGREQELIQAVKNGDVPGVQKLVAKIKASKSKLLGSAKRLNVNYQDADGFSALHHAALGG
SLDLISLLLEAQATVDIKDSNGMRPLHYAAWQGRLEPVRLLLRAAASVNMASLDGQIPLH
LSAQYGHYEVSEMLLQHQSNPCLINKAKKTPLDLACEFGRLKVAQLLLNSHLCVALLEGQ
SKDATDPNYTTPLHLAAKNGHKEIIRQLLKAGIEINKQTKTGTALHEAALYGKTEVVRLL
LEGGVDVNIRNTYNQTALDIVNQFTTSHASKDIKQLLREASGILKVRALKDFWNLHDPTA
LNVRAGDVITVLEQHPDGRWKGHIHDAQKGTDRVGYFPPSIAEVISKRTGMVVPRVAPAQ
QRQGPPGALPAPPGGLQHLPDECPHPAAPSGPAAFGHLTLSRTAPGPDSSAGDRNSVGSE
GSIGSIRSAGSGQSTEGTNGQSTSILIENARPLPSTGDNLQQHLLGSEPHNGTSPAGPQG
LQTPGSCPPGDRVFSHQFLRPEQLLEGKDAEAIYNWLREFQLESYTLNFINAGYDVPTIS
RMTPEDLTAIGVTKPGHRKKISTEIGQLSIAEWLPNYIPADLMDWLSAIGLPQYHKKLVN
NGYDSITIVTDLTWEDLQEIGINKLGHQKKIMLAVKKLRDLRKSLNQAEATLARRKVPGS
LDIVTIESLENGECQSPHTLKMTTFQDSELSYELQTAMSNSCHDTLGIKSSQGMSRSQES
IGVRSRGSGHSQDNVLSRRLSSPSQESLGSGESSSSSGQSCAPPRSKESPASLPGRPSPE
PYGKLVSPEGLNGFANGGGGGSPLKERNLPEGTDQYTRPAAQKGAGTPAVTPCTPPQTPS
KGTAPYVFMYPHVSLKSPTAPSVLGAEQPKALAHLPSISPAQKSSLQTSAQKGFSYLHSQ
CGPTEPPSTAPTAGEHHNGGEGLKHKKRSHSLNRYALSDGEHEEEEGAPSSTLGSYATLT
RRPGRSQMPRACLQADAKVTRSQSFAIRAKRKGPPPPPPKRLSSVSSALAAEADGEQPPS
PERQPTAPQDVADGGATPSDAGRGRTVKSLAAALEGTPGVSPSKPLLAPKPLHLTRDCLP
RADVGEGSHDGSDTSGATLSNGSRDPFESGKPRRRTVSEPSAPMTEVAAQGEQEDACSDT
EEEAKPGVSSSSSQNSSSECIPFAEEGNLTIKQRPKPSGHSKADAAVPDTEPGSQPAEPQ
GSGGKEAAAPAGSKEPPVLEFNLTESDTVKRRPRFREREPLQAVLKAFSMAGQAEAGGTP
TPQYAQAQAVSIAGPPTSAPQPTLAGDAFDDDSVEFRIAEIEKSILSLEKGMKKAPSPTK
APSPTELVGTAVVRTPTPGMGACGAVSNVVVGLPPMLRWEVRRTCATTYHESPSFADVPA
KHTSVASTKLVFSGPKTIYQQVLQPSRHTVAPWAATEAVPDVIGALPAPGSLTMETGSKV
SAKPLAAAPGATLAQQRLEQTNSSLAATLQAAEKKITVEEAESHPGTVHSAKNILEDISN
MFDDLADQLDAMLD
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgagcaggagctgatccaggccgtgaagaacggggacgtacctggagtgcag
aagctggtggccaagatcaaggcgtccaagagcaagctcctgggatctgccaagcgcctg
aacgtgaactaccaggatgcagacgggttctcagcgctgcaccacgcagccctgggcggc
agcctggacctcatctcgctgctgctggaggcgcaggccaccgtggacatcaaggacagc
aacgggatgcggcccctgcactacgcggcgtggcagggccgcctggagcccgtgcggctg
ctgctccgcgccgccgcctccgtcaacatggcctcgctggacgggcagatcccgctgcac
ctctcggcgcagtacggccactacgaggtgtcggagatgctgctccagcaccagtccaac
ccgtgcctcatcaacaaggcgaagaaaaccccgctggacttggcctgcgagttcgggagg
ctgaaggtggcccagctgctgctgaacagccatctgtgtgtcgccctgctggagggacaa
tccaaggatgccactgaccccaactacaccactccgctacatctggcagccaagaacggg
cacaaggagatcatcaggcagctgctgaaggctgggattgagatcaacaagcagacaaag
acaggcacagccctgcatgaggccgcgctctacggcaaaacagaggtggtgcggctcctg
ctggagggtggagttgatgtgaacatcaggaacacctacaaccagacagcactggacatt
gtcaaccagttcaccacctcacacgccagcaaggacatcaagcagctgttgagagaggca
tcaggaatcttgaaggtccgagctttgaaggatttttggaacctccatgacccaactgct
ctcaacgtccgagcaggagatgtcatcacggtcctggagcagcacccagatggccgatgg
aaggggcacatccacgacgctcagaaaggcaccgaccgggtcgggtacttccccccctcc
attgctgaagtcatcagcaagaggacaggcatggttgtgccccgcgtggcacccgcgcag
cagcgccagggtccccccggggccctgccagctccccctggggggctgcagcacctccct
gatgagtgtccacacccggcagccccgagcggcccagcggcctttggtcacctcacccta
agccggacggccccaggccctgacagctcagcaggagacaggaacagcgtgggcagcgag
ggcagcatcggcagcatccgcagcgccggcagcggccagagcaccgagggcaccaatggg
cagagcaccagcatcctcatcgagaatgccaggcctctgccctccaccggtgacaacctc
cagcaacaccttttgggatcagagccacacaatgggacctccccagcagggccacagggc
ctccagaccccaggcagctgcccccctggagacagggtcttctcccaccagttcttgcgt
cctgagcagctcctcgaggggaaggatgcagaagccatttacaactggctccgtgagttc
cagctggaatcgtacactctcaacttcatcaacgctggctacgatgtccccaccatcagc
cgcatgaccccggaggatctgacagccatcggtgtgaccaaaccaggccacaggaaaaag
atctctacagaaatcgggcagctcagcattgctgagtggctgcccaactacatcccggct
gacctgatggactggctcagtgccattgggttgccccagtaccacaaaaagctggtgaac
aacggctacgattccatcaccatagtgacagacctgacatgggaagacctgcaagagatt
ggcatcaacaagctgggccaccagaagaagatcatgttggctgtcaagaagctcagagac
ctccgcaaaagcctcaatcaagcagaagcaactttggcaagacgcaaagtccccggttcc
ctggacattgtcaccattgagtcgctggaaaacggggagtgccagtccccacacacgctc
aaaatgacaaccttccaggacagtgagctcagctatgagctccagacggccatgtccaac
agctgccacgacacactcggcatcaagagcagccagggaatgtcacggagccaggagagc
atcggggtgcggtcgcggggctcggggcactcgcaggacaacgtgctgtcccggcgcctc
tccagcccctcgcaggagagcctgggcagcggcgagagcagcagcagcagcgggcagtcc
tgtgcacccccccgcagcaaggagagcccggccagcctgccgggccggcccagccccgag
ccctacgggaagctcgtgtcccccgaggggctgaacggctttgccaatggtggcggcggg
ggcagccctctcaaggagaggaacctgcccgaaggaacggatcagtacacccggcctgcg
gctcagaaaggagctgggactccagcggtcactccctgtactcctccccagactcccagc
aagggaacagccccgtacgtcttcatgtacccacacgtctccctgaaatccccgacggcc
ccgtccgtcctgggagcggagcagcccaaggccctagcacatctcccctccatctcccct
gcacagaagagcagcctgcagacgtcagcccaaaaaggcttctcctacctgcacagccag
tgcggccccacagagccacccagcacagcccccacggctggggagcatcacaacggaggc
gaaggcctgaagcacaagaagcgctcgcacagcctgaaccgctacgcgctgtcggacggg
gagcatgaggaggaggagggggcccccagcagcaccctgggctcctacgccacgctgacg
cggcggccgggccgcagccagatgccgcgggcctgtctgcaggcggacgccaaggtgacc
cggagccagtccttcgccatccgggccaagcgcaaggggcctcccccgccgccgcccaag
cgcctcagctccgtgtccagcgccctcgctgccgaggcagacggggagcagccccccagc
cccgagcgccagcccacggcccctcaggacgtggctgacggaggtgccacccccagcgat
gctggccgtggcaggacagtgaagagcctggcggctgcgctggagggaacaccaggtgtg
agtccttccaagcccctcctggccccaaaaccgctgcacctgactcgggactgtctcccc
cgggcagatgtgggtgaggggtcccacgatggcagtgacaccagcggtgccacactttcc
aatggcagcagggacccctttgagagcggcaagccacggagacggacagtgagtgagccc
agcgctcctatgacagaggtggctgcacagggtgagcaggaggatgcctgctcagacact
gaggaggaggccaagccgggggtctcctcttcatcgtcccagaacagctccagtgagtgc
atcccctttgcagaagaaggcaatttaaccatcaaacagcggccaaagcccagcgggcac
tccaaggctgacgcggccgtgccggacacggagcctggttcccagccagcagagccgcag
ggctccggtgggaaggaggcagcagcccccgctggcagcaaggagccgcccgtgctggag
ttcaacctcaccgagtcggacacggtgaagcgccggccgcgcttcagggagcgggagccg
ctgcaggcggtgctgaaggcgttcagcatggcggggcaggccgaggcggggggcaccccc
acaccccagtatgcccaggcccaagccgtgagcatcgcgggcccccccacctcagcacca
cagcccacgctggctggggatgcctttgatgatgacagtgtggagttcaggattgctgag
atagagaaaagcatcttgtcgctggagaaagggatgaagaaggccccaagccccaccaaa
gcccccagccccacagagctggttggcacagctgtggtgaggacacccactccaggtatg
ggggcttgtggagctgtctccaacgtggtggtggggcttcctcccatgttgaggtgggag
gtgaggaggacctgtgccaccacctaccatgagtccccttcctttgcagatgtccctgcc
aagcacacctccgtggcatccaccaagctcgtcttctctggacccaagaccatctaccag
caggtcctgcagccctcccgccacactgttgccccctgggcggccaccgaggcggtgcca
gatgtgatcggggccctgcccgctcctggctcactgacaatggaaacaggcagcaaggta
tcagccaagcctttggcagctgccccgggggccaccctggcccagcagcggctggagcag
accaactccagcctggctgccacgctgcaggcggccgagaagaagatcacagtggaggag
gcagagagccaccctggaaccgtgcactcggccaagaacattttggaagacatcagcaac
atgttcgacgacctggctgaccagctggatgcaatgctggactga
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integrated database retrieval system
