Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455509
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Entry
135455509 CDS
T09958
Symbol
ABCA5
Name
(RefSeq) cholesterol transporter ABCA5 isoform X1
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135455509 (ABCA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zle02000
]
135455509 (ABCA5)
Transporters [BR:
zle02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
135455509 (ABCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_29
AAA_16
MMR_HSR1
nSTAND3
Dynamin_N
AAA_23
ATP-synt_ab
Rad17
Motif
Other DBs
NCBI-GeneID:
135455509
NCBI-ProteinID:
XP_064584844
LinkDB
All DBs
Position
18:complement(9869347..9919996)
Genome browser
AA seq
1674 aa
AA seq
DB search
MAPGAPREAGVWRQTRALLFKNCLIKCRTKKSSVQEVLFPLFFLFWLILMSMMHPHRKYD
EEVLFPLFFLFWLILMSMMHPHRKYDEVPNTDLGPLDPSVLLNFVIGYTPPTAQARDIMR
KVASDNFEDGLITEEYLSEEELEQASLLKPSNFVGVVFKDSLSYQLRFHDSIAMSSIYTE
SRATCSNLRKSCESVTYWSSGFTALQACIDAAIIQLKTNHSVWEQLDLTRAMVMGEAAVV
EIDNFPRAIILIYLVIAFSPFGYYLAIHIVAEKERKLKEFLKILGLHDTAFWLSWVLLYV
SLIFVMSILMAVIATASSLFPQSSAFVIFLLFFLYGVSSVFFALMLTPLFKKSKHVGIVE
FLATLVFGFVGLNIVLLEDFPKSFVWILSPLCQCSFLIGVAQVMHLEDYEDGATFANINA
GPYPLCISLILLVLDSIFYLLLAVYLDQVIPGEFGLRRTPFFFMKPSFWSKRRKNYKELY
ESSINGSLSFSEIVEPVPSEFQGKEAIRISCVQKTFRKKGETVEALRNLSFDIYEGQITA
LLGHSGTGKTTLMNILCGLCPPSDGFVSVYGHRVSEIDEMLEVRQIAGVCPQADIHFDIL
TVEENLSIFAAIKGIPQNDLIQEVQKVLLDLEMQPIRDNQAKKLSGGQKRRLSVGVAVLG
NPKVLLLDEPTAGMDPCSRHIVWNLLRSRKANRVTVFSTHFMDEADILADRKAVISQGML
KCLGSSLFLKSKWGIGYRLSMHIDAYCNTEATTSLIRQHIPAASLIQQNDEQLVYTLPLK
DMDKFAALFSDLDTHSHLGVITYGVSMTTLEDVYLKLEVEAEIDQADYSVFHSQQAQEEV
DTKSLDDMEQSLLMLSEAKAPAMSNSALWKKQVSTIAKVHFLSLKRENKCVRVMLLLFLI
FLVVQILLFFIHHIIKNAVAAIKLSPDLYLLKPGESSHKYRSRLLLQNSTESDISDIVHS
LGSMNILWEMFNDSDYVSVAPHSAALNVFALQSRQNYVFNIIFNSTMVHSLPVLMNIVSN
LLLRSLNVTESIQIWSNPFIQDLPDTIFRLEIYFEAVLLGIIITGMPPYFAMDNAENHKI
KAYTQLKIAGLYPSAYWTGQAVVDLPLFFLILILMIGSLFAFHYGVYFYVGKFLAVIFCL
IGYVPSVVLFTYVVSFTFRKVQNTKEFWSFIFSVTALLCTVVTEVSFFLDHYLVTTILHY
VFSIFIPIYPLIGCLICFIKVSWKGKSESGGFHDPWDRLLVAVLAPYLQCVLWLFLLRCF
ELKNGGRTVREDPFFRKCFTKAKPWKFPDVPHEENEDEDVKAERLRVKEILSSPRSEEMP
AILVSSLHKEFDERKEFLLGRKIKKVATKHVSLCVKKGEILGLLGPNGAGKSTLINMLVG
EIEPTSGQVLMGDDSLGLSSEDDSVKFVGYCPQTNPLWPDITLQEHFEIYGAIKGMSQAD
VKEVIKRIASVLDLKDHLQKTTKKLGMGLKRKLCFALSMLGNPRVTLLDEPSTGMDPKAK
QHMWRAIRAAFKNKERAAILTTHYMEEADAVCDRVAILVSGQLRCIGTVQHLKSKFGRGY
FLEMKLRETADVQQVEYLQSQILHIFPNANRQESFASILAYKIPKEDVQSLSHCFSKLEE
VKHAFNIEDYSFSQATLEQVFVELAKEQEEEDSSFGTLNSSLWWERTQEDRVIF
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atggccccaggagctccaagggaggccggagtgtggaggcaaacccgagctctgctcttc
aagaattgtctgatcaagtgcaggaccaagaagagcagtgtgcaggaggtgcttttccct
ctgtttttcctcttctggctgatcctgatgagcatgatgcaccctcacaggaaatatgat
gaggaggtgcttttccctctgtttttcctcttctggctgatcctgatgagcatgatgcac
cctcacaggaaatatgacgaggtgcccaacacagacctgggccccctggacccctcggtg
ctgctgaattttgtcattggctacaccccccccacggcccaggctcgggacatcatgagg
aaagtggcttcggacaactttgaggatggcctcatcactgaggagtatttgagtgaggag
gagctggagcaggcgagtttgctcaagccctccaactttgtgggcgtggtgttcaaggac
tccctgtcctaccagctgcgcttccacgactccatcgccatgtcctccatctacaccgag
tccagagccacgtgctccaacctgcgcaagagctgcgagtccgtgacctactggagctcg
gggttcacagccctgcaggcctgcattgatgctgccatcatccagctgaaaacaaatcat
tctgtctgggaacagctggatctgaccagagccatggttatgggagaggctgcagtggtg
gaaattgataatttccctcgtgcaatcattttaatttacctggtgattgcgttctccccc
tttgggtattatttggcaattcacatcgtggcagaaaaggagaggaagctgaaggagttc
ttgaaaattttgggactccatgacactgccttctggctgtcctgggtgctgctctacgtc
agcctgatttttgtcatgtccatcctgatggccgtgattgccacagcctcgtccctgttc
ccccagagcagtgcctttgtcatattcctgcttttcttcctctatggagtctcctctgtg
ttctttgccctgatgctgacccctctgtttaagaagtccaagcacgtggggatcgtggag
ttcttggcaactttggtgtttggctttgtgggcctcaacatcgtcctgctggaggatttc
cccaaatccttcgtgtggatcctcagccctttgtgtcagtgcagcttcttgattggtgtt
gcacaggtgatgcacctggaggattatgaggatggggcaacatttgcaaacatcaatgct
ggcccttaccctctgtgtatctctctgattctcctggtgctggacagcattttttacctg
ctgctggctgtctacctggaccaggtgatcccaggtgagtttggcctgcgccgcacgccc
tttttcttcatgaaaccctccttttggtcaaagcgcaggaaaaactacaaggagctgtac
gagagcagcatcaacggcagcttgagcttcagtgagattgtggagcctgtgccttcagaa
ttccagggcaaggaagccatcagaatcagctgtgttcagaaaacattcaggaagaagggg
gagaccgtggaggctctcagaaatttgtcctttgacatctacgaggggcagatcacggca
ctgctgggccacagcggcaccgggaagacgacgctgatgaacatcctgtgtgggctgtgc
cctccctctgatgggtttgtgtcagtctatgggcacagggtgtctgagatcgacgagatg
ctggaggtgcggcagatcgcgggcgtgtgtccccaggccgacatccacttcgacatcttg
actgtggaggagaacctctccatctttgctgccatcaagggcatccctcagaacgatttg
atacaagaggtgcagaaggtgttgctggatttggagatgcagcccatcagggacaatcaa
gccaaaaaattaagtggggggcagaagaggaggctgtcagtgggagttgctgttcttggg
aaccccaaggttttgctgctggatgagcccacggcagggatggatccctgctcccgccac
atcgtctggaacctgctgaggagcaggaaagccaaccgtgtgacagtgttcagcacccac
ttcatggacgaggctgacatcctggctgatcgtaaagctgtgatttcccaagggatgctg
aaatgccttggctcttctctcttcctcaagagcaagtggggcattggctaccgcctgagc
atgcacattgatgcctactgcaacacagaggccaccacgtctctgatcaggcagcacatc
cctgcagccagcctgatccagcagaacgatgagcagctcgtgtacaccctccctctcaag
gacatggacaagtttgcagctttgttctctgacctggacacccattcccacctgggggtc
atcacctatggtgtgtccatgaccacgctggaggacgtttacctgaagctggaggtggag
gcagagattgaccaagcagattacagcgtgttccactcgcagcaagcccaggaggaggtg
gacaccaagtccctggatgacatggagcagagcctgctgatgctctccgaggccaaggca
ccagccatgagcaactcagccctgtggaagaagcaggtctccaccatagccaaagtgcac
ttcctcagcctgaaacgggagaacaaatgtgtcagagttatgttgttgcttttcctcatt
ttccttgtagttcagattttgttgtttttcatacaccacatcatcaaaaatgctgtagct
gctatcaaactctccccagatttgtacttgctgaagcctggagagagcagtcacaagtac
aggagtcggctcctgctgcagaactccacagagtcggatatcagtgacattgtgcactcc
ctggggagcatgaacatcctctgggagatgttcaatgacagtgattatgtctcagtggca
cctcacagtgcagctctgaacgtgtttgccctccagtccaggcagaattatgttttcaac
atcatattcaacagcaccatggtgcattccctgccagttctgatgaacattgtcagcaac
ctcctcctgcgcagcctgaatgtgactgagagcatccagatctggagcaaccccttcatt
caggaccttccagacacaattttcaggctggagatctattttgaagccgtgttactgggg
atcatcatcactgggatgccaccctacttcgccatggacaatgcagaaaaccacaagatc
aaggcttacacccagctgaagattgcagggctctatccctcagcctactggactggccag
gctgtggtggacctgcctctgttcttcctcatcctcatcctcatgattggcagcctcttt
gccttccactacggtgtttatttctatgtgggcaagttcctggctgtgattttttgcctg
attggttacgtcccctccgtcgtgctcttcacctacgtggtctccttcaccttcagaaaa
gtccagaacacgaaggaattttggtcatttatattttcagtgacagccctgctgtgcaca
gtggtcactgaggtgtcctttttcctggaccattacctggtgaccaccatcctgcactat
gtcttctccatcttcatccctatttatcccctcattggctgcctgatttgttttataaag
gtctcatggaaaggcaagagtgagagtgggggattccacgacccctgggaccggctgctg
gtggcagttctggctccctacctgcagtgtgtgctgtggctgttcctgctgcgctgcttc
gagctcaagaacggcgggaggacggtcagagaagatcccttcttcaggaaatgtttcacc
aaagccaagccctggaagttcccagatgtgcctcacgaggagaatgaggatgaggatgtg
aaggcagagaggctgagagtcaaagagatcctgagcagccccaggagtgaggagatgcca
gcaatcctggtcagcagcctgcacaaagagtttgatgagaggaaggaatttcttctgggg
agaaaaataaagaaagtggcaaccaaacatgtttccctctgtgtgaagaaaggagaaatc
ctgggtttgttgggacccaatggagctgggaaaagcacattaattaatatgcttgttgga
gagattgagccaaccagtgggcaggtgctgatgggagatgattccttggggctgagcagt
gaggatgactctgtgaaattcgtggggtactgtccccagacaaatcctctgtggccagat
atcacactgcaggagcactttgagatttatggtgccatcaaaggcatgagccaggctgat
gttaaagaggtcatcaaacgcatcgccagcgtgctggatctgaaggaccacctgcagaag
accacaaagaagttgggcatggggctgaaacgcaagctctgctttgccctcagcatgctg
ggcaacccgcgggtgacgctgctggacgagccctccacggggatggaccccaaggccaag
cagcacatgtggagggcaatccgagcagcctttaagaacaaggagagagcagcaatcctg
accacgcactacatggaggaggcagatgctgtctgtgaccgtgtggccatcctggtgtca
gggcagctcaggtgtataggtactgtccaacacctgaagagcaaatttggaagaggatac
ttcttggaaatgaaattaagggaaacagcagatgtgcagcaggtggagtatctgcagagc
cagattctgcacatcttccccaacgccaaccgccaggagagttttgcttccatcttggcg
tataaaattcccaaagaagatgtacagtcactttcacattgtttttccaagctggaggaa
gtaaaacacgccttcaacatcgaggactacagcttttcccaagcaacactggaacaggtg
tttgtggagctggctaaggagcaggaggaggaggacagcagctttggcaccctgaacagc
agcctgtggtgggagaggacacaggaggacagagtcatcttctga
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integrated database retrieval system
