Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455516
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Entry
135455516 CDS
T09958
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03015
mRNA surveillance pathway
zle05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135455516 (CPSF4L)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135455516 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135455516 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
zle03019
]
135455516 (CPSF4L)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135455516 (CPSF4L)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135455516 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_3
Apolipo_F
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
135455516
NCBI-ProteinID:
XP_064584861
LinkDB
All DBs
Position
18:complement(11029741..11033712)
Genome browser
AA seq
266 aa
AA seq
DB search
MMQELVAGMERISLDSEADVEQLRAQPLPFPGVDSVQGHPRPGRTKPAVCKHWLRGLCKR
GESCDFLHGYDASRVPECYFYSRFGECSNKDCPFLHAGATASTGRCPWYDRGFCWHGPLC
KYKHMRRVMCANYLVGFCPEGPKCKFVHLKAGLMPSSTDPSKGAGCPWGLVQRDLAAAED
GGERISQTLCQPEQEDSAGNAAGKVTAVLHTAQERMRRMRRRTTHTMDTAPGQPAGSAQH
SSQHRKHCMQCQSGPGTAGCSPGTAG
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaggagctggtggctggcatggagaggatcagcttggactcggaggctgatgtg
gagcagctcagagctcagcccctgcccttcccgggggtggacagtgtgcagggccacccc
cggcccggcaggaccaagcccgccgtgtgcaagcattggctgcgagggctctgcaagaga
ggtgaaagctgcgatttcctgcacggctacgatgccagccgggtgcccgagtgctatttc
tactccaggttcggggagtgcagcaacaaggactgtcccttcctgcacgccggtgccacc
gccagcaccgggcgctgtccctggtacgaccgaggcttctgctggcacggtcccctgtgc
aagtacaagcacatgaggagggtgatgtgtgccaactacctggtgggcttctgccccgag
ggacccaagtgcaaattcgtgcacctcaaggccgggctgatgccgagcagcacagaccca
tccaagggagctggatgcccatgggggctggtacagagggacctggctgctgcagaggac
gggggagagaggatcagccagaccctgtgccagccagagcaggaggactcagctggaaat
gctgctgggaaagtgactgcagtgctccacacagctcaggagaggatgaggaggatgagg
aggaggacgacacacaccatggacacagcaccgggacagccagcagggtctgcccagcac
agctcacagcacagaaagcactgcatgcaatgtcaatcggggcctggcacagctggctgc
tcccctggcacagctggctga
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integrated database retrieval system
