Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455619
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Entry
135455619 CDS
T09958
Symbol
MMP28
Name
(RefSeq) matrix metalloproteinase-28
KO
K08006
matrix metalloproteinase-28 (epilysin) [EC:3.4.24.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135455619 (MMP28)
Peptidases and inhibitors [BR:
zle01002
]
Metallo peptidases
Family M10
135455619 (MMP28)
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
DUF4953
Reprolysin_4
Reprolysin_3
Reprolysin_5
Peptidase_M57
Metallopep
Peptidase_M66
Peptidase_M54
Reprolysin_2
Motif
Other DBs
NCBI-GeneID:
135455619
NCBI-ProteinID:
XP_064585034
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All DBs
Position
19:5456475..5475633
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AA seq
498 aa
AA seq
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MAAPLRAALALGLLAAAQPAPAPAQRRQAELFLEKYGYFRERGASTHSPAEFSKALRDFQ
RVTHLPASGVLDAPTLHQMALPRCGTDDGHSRTVPARRHRRSAQHGGRWPKRQLTYRVVN
RPPYLPQHGVRLAVRAAFQLWSNVSSLLFWEAHEGPADIRLTFFHGDHNDGLNNAFDGPG
GALAHAFLPRRGEAHFDSAERWSLHSGKGRNLFIVVAHEVGHTLGLQHSPVKSALMSPYY
KKLSKDFVLSWDDILAIQSLYGKPSKGSAIQLPGKVFTHFQDWNTDLYSRDQQQRSLSTY
YCHTFFDAITSDGDHNLYIFKGSHYWVVSGSGNASEPQALQPRWPGLPAGIDACAWSQST
GKFYFFKGGRCWRYAGSQLDAGFPRKCSALGLPRHPDTALYFQQLRRLVLFKGPKYFVLG
EDPMAVEPYYPRSLRDWAGLPPGTAGALTHRDRALYFFRDDRFWKFDQDKLQVVATGKWA
TQLAWMGCWDANSEQVLF
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgccgctgcgggcggccctggcgctggggctgctggcggccgctcagcccgca
ccggccccggcacagcggcggcaggcggagctcttcctggagaaatacggctatttcagg
gagcggggggccagcacacacagcccagccgagttcagcaaggcgctgagggatttccag
cgtgtgacccacctccctgccagcggggtgctggatgcccccaccctccatcagatggcc
ctgcccaggtgtggcacggatgacgggcacagccgcactgtccccgcccggcgccaccgg
cgctcggcacagcacggagggcggtggccgaagcggcagctgacgtaccgcgtggtgaac
cggccgccgtacctgccgcagcacggcgtgcgcctggccgtgcgcgccgccttccagctc
tggagcaacgtgtcctccctgctcttctgggaggcacacgagggccccgccgacatccgc
ctcaccttcttccacggcgaccacaacgatggactcaacaacgccttcgatgggccagga
ggtgccctggcccacgccttcctgccccggcgaggagaagctcactttgacagcgctgag
cgctggtccctgcacagtggcaaggggaggaacctgttcatcgtggtggcccacgaggtg
gggcacacgctggggctgcagcactcgcccgtcaagagtgccctcatgtcaccctactac
aagaagctcagcaaggattttgtcctcagctgggatgacatcttggccatacagagtttg
tacggaaagccctccaagggctcggccatccagctcccaggaaaggtcttcactcacttc
caggactggaacacggatctttacagcagggaccaacagcagaggagcctcagcacctac
tactgccacaccttcttcgatgccataacctctgacggggatcacaacctctacatcttc
aagggcagccactactgggtggtgtcgggcagtggcaacgccagtgagccccaggctctg
cagccgcgctggcccggcctccccgccggcatcgacgcctgcgcctggtcccagagcacg
ggcaagttctacttcttcaaaggtggccgctgctggcgctacgctggctcccagctggac
gcgggattcccccgcaaatgcagcgccctggggctgccccggcacccggacaccgcgctc
tacttccagcagctccggcgcctcgtcctcttcaagggccccaagtacttcgtgctgggc
gaggatcccatggccgtggagccctactacccccggagcctgcgggactgggcagggctg
cccccgggcaccgccggcgctctcacccaccgcgaccgcgccctctacttcttcagggac
gatcgcttctggaaattcgaccaggacaagctgcaggtggtggccaccggcaaatgggcc
acgcagctggcctggatgggctgctgggatgccaacagtgagcaggtgctgttctga
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