Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455623
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Entry
135455623 CDS
T09958
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135455623 (SUPT6H)
03036 Chromosome and associated proteins [BR:
zle03036
]
135455623 (SUPT6H)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
135455623 (SUPT6H)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
135455623 (SUPT6H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
135455623
NCBI-ProteinID:
XP_064585038
LinkDB
All DBs
Position
19:7098871..7126166
Genome browser
AA seq
1721 aa
AA seq
DB search
MSDFVESEAEESEEEYNQDGEVVPRVTKKFVEEDEDDEEEEELNLDDQDEQGNLKGFIND
DDDEEEEEEASDSGDSEDDVGHKKRKRTFDDRLEDDDFDLIEENLGVKVKRQKFRRVRKM
SDDEDDEAEDYGKEEHEKEAIAEEIFQDGEGEEGGEAVEAPVAPQEEEEEEEEDESDIDD
FIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEEMEEEYEYE
DEEAEGETRVRPKKAAKKRVSRRSIFEMYEPSELESSHLTDQDNEIRMTDMPERFQLRSI
PVKSAEDDELEEEADWIYRNAFATPTISLQETSDYLDRGQASSFGRKGPSTIQKIKEALN
FMRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKQNLTRLFEKMQAYQ
YEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKA
ARKKQKRIREDGEEEEGEGEDAEDDEQKGPELKQASRRDMYTICQAAGLDGLAKKFGLTP
EQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPSPEAVLEGARYMVALQIAREPLVR
QVLRQTFQERAKINITPTKKGKKDIDEAHYAYSFKYMKNKPVKELRDDQFLKMSLAEDEA
LLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERSLNQFLYV
QMAKELKNKLLVEAKEYVLKACSRKLYNWLKVAAYRPDQQVEEDDDFMDENQGKGIRVLG
IAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRNAWREEEREKKAQDIETLKKFLLNK
KPHVVTIAGENRDAQMLMEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSENEF
RDYPPLLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKLHPLQEHVVKEELLNALYCEFI
NRVNEVGVDVNRAIAHPHSQALLQYVCGLGPRKGTHLLKILKQNNTRLENRTQLVTMCHM
GPKVFINCAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDA
NPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTPYRS
PNTEEVFNMLTKETPETFYIGKMIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQ
DNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVAGFIPTKFLSDKVVKRPEERVKVGMTV
HCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDSEAADHKQEEDMKRKQQRT
TYIKRVIAHPSFHNISFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVNDGIYQHVDV
REEGKENAFSLGSMLWINTEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCNGGDKKKL
EELLIKTKKEKPTFIPYFISACKDLPGKFLLGYQPRGKPRIEYVTVTPEGFRYRGQVFPT
VNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTSQM
FSAIAAVTGQGQNPNATPAQWGSSQYGYGGSGGGSSAYHVFTTPAQQPVATPLMTPSYSY
TTPSQPITTPQYQLQANTTPQSTQSQSQPSSSSRQRQQPKTNTHAAIDWGKMAEQWLQEK
EAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttgtggagagcgaagcagaggagtcagaggaggagtacaaccaggatggg
gaggttgtacccagagtaaccaagaagtttgtggaggaagatgaggatgatgaggaagag
gaggagctgaacctcgatgatcaggatgagcaggggaacctgaagggattcattaacgat
gatgacgatgaggaagaggaggaggaagccagtgactctggagactccgaggatgacgtt
ggccacaaaaagagaaagcgcacttttgatgaccgcctggaggatgatgactttgacctc
attgaagaaaacttgggagttaaagtcaaaagacaaaaattcaggcgagtgcgaaaaatg
tctgatgatgaggatgatgaggcagaagattatggaaaggaagaacacgagaaggaagcc
attgctgaagaaatctttcaggatggtgaaggcgaggaaggaggggaagctgtggaagct
cctgttgctccacaggaggaggaagaggaggaggaggaagatgaatctgacattgatgac
ttcattgtggatgatgatggacaacctctgaagaagccaaaatggagaaagaagcttcca
ggatacacagatgctgctttgcaagaagcccaggaaatctttggtgtagactttgactat
gatgagtttgagaagtacaacgagtacgatgaggagatggaggaggagtacgagtacgag
gatgaggaggcggaaggggagacgcgcgtgcggcccaagaaggcggccaagaaacgcgtc
agccgccgcagcatcttcgagatgtacgagcccagtgagctggagagcagccacctcacg
gaccaggacaacgagatccgcatgacagacatgcctgagaggttccagctgagatccatc
ccagtgaagagtgctgaagatgatgagctggaggaagaagctgactggatttacaggaat
gcctttgcaactcccaccatctccttgcaggaaacttctgactaccttgaccgtggacaa
gccagcagcttcggccgcaagggccccagcaccatccagaagattaaagaagccctgaat
ttcatgagaaatcagcattttgaggtcccgttcattgccttctacagaaaggagtatgtg
gagccagagctgcacatcaacgacctgtggagggtctggcagtgggatgagaagtggacc
cagctgaagatccgcaagcagaacctgactcgactgtttgagaagatgcaggcctaccag
tatgagcagatctctgctgacccagacaagcccttggctgatggaataagggccctggat
actactgacatggagaggctgaaggacgtgcagtccatggacgagctgaaggacgtgtac
aatcacttcctgctgtactatggcagagacatccccaagatgcagaatgctgccaaggcc
gctcgcaaaaagcaaaagcggatccgggaggatggtgaagaagaggaaggtgaaggggag
gatgcagaggatgatgagcagaaggggcctgagctgaagcaggcttcccgaagggatatg
tacaccatctgccaggcagctgggctggatggcttggctaagaaatttggtctgacacct
gagcagtttggagagaatctccgagacagttaccagcgtcacgagactgagcagttccct
gcagagcccctggagctggccaaggattatgtgtgtagtcaatttccaagcccagaagca
gtgctggaaggagctcggtacatggtggctttgcagatcgccagggagcccctggtcaga
caggtcctgagacaaactttccaggaacgagctaaaatcaacattacaccaaccaaaaag
gggaagaaggatattgatgaagcccactatgcctattcctttaaatacatgaagaacaag
cctgtgaaggagctgagagatgaccagttcctgaaaatgagcctggcagaggatgaggca
ctgctcaccatagatatcagcattgacatgaaaggagtggagggttatggcagtgaccag
acatactttgaggaaatcaagcagttctattaccgggacgagttcagtcaccaggtgcag
gagtggaaccggcagcgcaccatggccatcgagcgctccctcaaccagttcctctacgtg
cagatggccaaagaattaaagaacaagctcttagtggaggccaaggagtatgtcctcaag
gcttgcagccgcaaactgtacaactggctgaaggttgctgcatacaggccagaccagcag
gtggaggaagatgatgatttcatggatgagaaccaagggaaggggatccgggtgctgggc
attgccttttcatcagccagggaccaccctgtgttttgtgccctcgttaatggagagggt
gaggtgacagatttcctccgactgccacatttcacaaagagaaggaatgcctggcgtgag
gaggagagggaaaagaaggctcaggatattgaaacattgaaaaaattcctcctgaacaag
aagcctcacgtggtgacaattgcaggcgagaacagggatgctcagatgctgatggaggat
gtaaagagaattgttcatgagctggaccaagggcagcagctgtcctcaatcggggtggag
ctggtggacaatgaactggccatcctctacatgaacagcaagaagtctgagaatgaattc
cgggattacccccctctgctgcgccaggccgtgtccctcgcccgccgcatccaggacccc
ctcatcgagtttgcccaggtctgcagctctgatgaggatattctctgcctgaaactccac
cctctgcaggagcacgtggtgaaggaggagctgctgaacgcgctctactgcgaattcatc
aaccgcgtgaacgaggtgggggtggatgtgaacagggccattgctcacccccacagccag
gctctgctgcagtacgtgtgtggcctgggaccacgcaagggcactcacctgctgaagatc
ttaaaacaaaacaacacccgtctggagaacaggacccagctggttacgatgtgtcacatg
ggacccaaagtgtttatcaactgtgctggcttcatcaaaattgacacagcatcactgggt
gatagcactgattcctacattgaagtcttagatggctctagggtccatcctgaaacctat
gaatgggccaggaagatggcagtggatgccctggaatacgatgagtcagctgaggatgca
aatcctgcaggagctctggaggagatcctggaaaaccccgagcgcctgaaagacctggat
ctcgatgcctttgctgaagaactggaaagacagggctatggtgacaagcacatcactttg
tatgacatccgagctgagctaagctgcagatacaaggacctgagaaccccgtaccgctct
cccaacacagaggaggtcttcaatatgctgaccaaagaaactccagagacattttacata
ggtaaaatgatcatctgcaatgtgactgggattgcccacaggcgcccacagggagagagc
tacgaccaggcgatacggaatgacgaaactggcctttggcagtgccccttctgccagcag
gacaacttcccagagctcagtgaggtttggaaccattttgacagcggttcctgcccaggt
caggccattggagtgaagacacgtctggataatggcgttgctggcttcatcccaacaaaa
tttcttagtgacaaggtggtcaagaggccagaagaaagggtgaaggtgggaatgaccgtc
cactgccgcatcatgaagattgacattgagaagttcagtgcagacctgacctgcaggacc
tcagacctgatggacaagaacaatgagtggaaactgcccaaagacacctactacgacttc
gactccgaggcagcagaccacaaacaagaagaagacatgaaaagaaagcagcagaggaca
acgtacatcaagagggtaattgctcacccatcattccacaacatcagcttcaagcaagca
gagaagatgatggagaccatggaccaaggggatgtgatcatccggcccagcagcaaaggg
gagaaccacctgactgtcacctggaaggtcaacgatggcatctaccagcacgtggatgtc
cgggaggagggcaaggagaatgccttcagcctgggctccatgctctggatcaacacagag
gagtttgaagacctggatgaaattgttgctcgttatgtccagccaatggcttcttttgcc
agagacctgttgaaccacaaatactatcaggactgcaatggtggagacaagaagaagctg
gaagagctgctgataaagaccaagaaagagaagccaacatttattccatactttattagt
gcctgtaaagacctacctggtaaattcctcttgggatatcagcctcgaggcaaaccaagg
atagagtatgtgacagtgactccagagggattccgctaccggggccaagtcttccctact
gtgaatggacttttccgatggtttaaggatcattatcaggaccctgttccaggtatcacc
cccagcagcagcagtcggaccaggactccagcctccattaatgctactccagctaacatc
aacctggcagacctgacacgtgcagtgaatgctctgccacagaacatgacctcccagatg
ttcagtgccattgctgctgtgacaggccagggacagaacccaaatgccaccccagcacag
tggggctccagccagtacggctacgggggcagcggcggcggcagcagcgcgtaccacgtg
ttcacaactccagcacagcagccagtggccacccccctgatgacccccagctactcctac
actactcccagccagcccatcaccacgccccagtaccagctgcaggccaacaccacgccc
cagtccacgcagtcccagtcgcagccctcatccagctccaggcagaggcagcagccaaag
accaacacccacgctgccatcgactggggcaagatggccgagcagtggctgcaggagaag
gaggctgagcggaggaaacagaagcagaggttgacccctcgcccttctcccagccccatg
atcgagagcacgcccatgtccatcgccggggacgccacgcctctcctggatgagatggat
cgatag
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integrated database retrieval system
