Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455686
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Entry
135455686 CDS
T09958
Name
(RefSeq) pinopsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
zle04030
]
135455686
G protein-coupled receptors [BR:
zle04030
]
Rhodopsin family
Vision
Opsin
135455686
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srw
7tm_4
CitMHS
7TM_GPCR_Srh
Motif
Other DBs
NCBI-GeneID:
135455686
NCBI-ProteinID:
XP_064585174
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All DBs
Position
19:8567909..8570637
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AA seq
348 aa
AA seq
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MESTQEPPNSSTPGPFDGPQWPHQAPRAMYVAVAVLMGLVVASASVLNGLVIVVSIRHKR
LRSPLNYILVNLAVANLLVTLCGSSVSLSNNIQGFFVFGERLCQLEGFMVSLTGIVGLWS
LAILALERYLVVCRPLGDFRFQRRHAASGCAFTWGWSLLWTTPPLLGWSSYVPEGLRTSC
GPNWYTGGSNNSSYILALFVTCFVVPLSLILFSYTNLLLTLRAAAAQQQESDTTQQAERE
VTRMVVAMVVAFLTCWLPYTTFALVVATNKDIVIQPALASLPSYFSKTATVYNPIIYVFM
NKQFQSCLLGMLCCGYHPRGMGKTSPAAPSPQVAAEGLRNKVTPSHPV
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggagagcacccaggagcctccaaacagcagcaccccggggccctttgatggcccccag
tggccccaccaggcccccagggccatgtacgtggctgtggccgtgctcatggggctggtg
gtggcctcggcctcggtgctcaatggcctggtcatcgtggtgtccatccggcacaagagg
ctgcgctcgcccctcaattacatcctggtgaacctggccgtggccaacctgctggtgacg
ctctgcggcagctccgtcagcctctccaacaacatccagggcttcttcgtgtttggggag
cgcctctgccagctggagggcttcatggtgtccctgacaggcatcgtggggctgtggtcc
ctggccatcctggccttggagaggtacctggtggtctgcagacccctgggagactttcgg
ttccagcgccggcacgctgccagcggctgtgccttcacctggggctggtccctgctctgg
acaaccccaccactgctgggctggagcagctacgtgcctgaaggcctgagaacctcctgc
gggcccaactggtacacgggcggcagcaacaacagcagctacatcctggccttgtttgtc
acctgcttcgtggtgcccctcagcctgatcctcttctcctacaccaacctgctgctgacg
ctgcgggcggccgcagcacagcagcaggagtcggacacgacgcagcaggcggagcgggag
gtgacacgcatggtggtggccatggtggtggccttcctcacctgctggctgccctacacc
acctttgcactggtggtggccaccaacaaggacattgtcatccagccagccctggcatcc
ctgccctcctacttctccaagacggccacggtctacaaccccatcatctacgtcttcatg
aacaaacagttccagagctgcctgctgggaatgctgtgctgtggttaccaccccaggggc
atggggaaaacctctccagctgcccccagtccccaggtggctgcagaggggctgaggaac
aaggtgacaccatcccaccctgtgtga
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