Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455691
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Entry
135455691 CDS
T09958
Symbol
RNF169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135455691 (RNF169)
03400 DNA repair and recombination proteins [BR:
zle03400
]
135455691 (RNF169)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
135455691 (RNF169)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
135455691 (RNF169)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
135455691 (RNF169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf-RING_2
Prok-RING_4
zf-RING_4
zf-RING_5
zf-RING_UBOX
HTH_32
Motif
Other DBs
NCBI-GeneID:
135455691
NCBI-ProteinID:
XP_064585183
LinkDB
All DBs
Position
1:116226398..116241548
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AA seq
654 aa
AA seq
DB search
MAAAAADAGGRAAVRGRRRRGRPAAQEEQEAVVLAVAECPVCRQALVEAVTPPCRHSLCL
ACFQRCLQGPGLCCPLCRSRLSTRARRQQAEPAATTAAGAAGGEQRPPEQDFIFRAPIKL
SKTGELREEYESQLRKLREEKLQEEKTSEDLIHKFILDDMDIGKRKMEEQQKKDESVVLK
GNQDCFPERLSDSENEEPFQGKQTHRSAFVSKTSAYSFAFLSGNLTSKVERSRSCNDTIQ
ERSKSRQRSAPATKAKVPAGPAPLLGVLSCAQNHRCLSAPELSAERRLLLSAASSLSALH
RPERSISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKP
TTYEASPRILKKWEQIFQERQIKKTLSKATLTSLASEPGEDVVVPDITNASSCTKEQPQA
QEDHLAPDTTTGEPRPELDFLPSVSEVRLGRGSEKNGGSQALATDDGAAEPDVRSNVTSL
NTRVAEAPDLKVNTFMDKSCLSLGPKALSRRLMGIGASLPDGGALAVPLKGKKQLKYLNN
SELINVQNSTCSSVEKLLGEQAPLLRRGRKRRCKTKHLEHNGSVKRLRHAAPGEAALPPE
GRDSVEQKLQQEEEDRRLALHLQRIFDSENRTVERRRVRVDRYLLRSKSTLGAK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggatgccggcggccgggccgcggtgcgggggcggcggcggcgg
ggccggcccgcggcccaggaggagcaggaggcggtggtgctggcggtggccgagtgcccg
gtgtgccggcaggcgctggtggaggcggtgacgccgccctgccgccactcgctctgcctc
gcctgcttccagcgctgcctgcagggcccgggcctctgctgcccgctgtgccgcagccgc
ctctccacacgggcccggcggcagcaggccgagcccgcagccaccacggcggccggagca
gcgggcggggagcagcggccgccggagcaagactttatattcagagcacccattaaatta
agcaaaacaggagagctccgagaagaatatgaaagccagctgaggaagctgagagaggaa
aagctacaagaagaaaagacgtctgaggatctgattcacaagttcatcctagatgacatg
gacatagggaaaagaaaaatggaggagcagcagaaaaaagatgaatctgtagtgctgaaa
gggaaccaggactgttttccggagcgtctctcggactcggagaacgaggaaccattccag
ggcaagcaaacacaccgctcagcttttgtttccaagaccagcgcttactcctttgctttc
ctttcagggaatttaacctccaaggtggagaggagccggagctgcaacgacaccattcag
gagagatccaagagcaggcagaggtcagccccagccaccaaagccaaggtgccggccggc
cccgcgccgctgctgggcgtgctgtcgtgcgcgcagaaccaccgctgcctgtcggcgccg
gagctgagcgccgagcggcgcctgctgctcagcgccgcctcctcgctgtcggcgctgcac
cgccccgagcgctccatcagccccgagagcaacgacagcatctccgaggagctcaaccac
ttcaagcccatcgtgtgctccccgtgcacgccccccaagcggctgcccgacggcagagtg
ctcagccccctcatcatcaagtccacccccaggaacctgaaccgcagcctgcagaagccc
accacctacgaggccagtcctaggatactgaagaagtgggagcagatatttcaggagcgt
cagatcaaaaagactctctccaaagcaaccctcacgtccttggcttcggagcccggggag
gacgtcgtggttcctgacatcaccaacgccagcagttgcactaaagagcagccacaagcg
caggaggatcaccttgcacctgacacgacgacgggagagcctcgccctgagctggatttc
ctcccttctgtcagtgaagtgaggctgggaaggggcagtgagaagaacgggggttcgcag
gccttagccactgatgacggtgctgcagaaccagatgtgagatcaaacgtaacctcccta
aacacacgggtggctgaggcccccgacctgaaggtgaacacattcatggacaagtcctgc
ctcagcctgggccccaaagcgctgagcaggaggctcatgggcatcggcgcgtccctgccc
gacggcggcgcgctggcagtgcccctcaagggcaagaagcagctgaagtacctgaacaac
agcgagctgatcaacgtgcagaacagcacgtgcagctccgtggagaagctcctcggcgag
caggcgccgctgctgcgccgcggccgcaagagacgctgcaaaaccaagcacctggagcac
aacggctccgtcaagagactgaggcacgcggccccgggggaggcggcgctgccccccgag
ggccgggacagcgtggagcagaagctccagcaggaggaggaggacaggaggctggccctg
cacctgcagcgcattttcgacagcgagaacaggacggtggagaggcgcagagtgcgcgtg
gaccggtacctgctgcgctccaagagcacgctgggcgccaagtag
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integrated database retrieval system
