Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455709
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Entry
135455709 CDS
T09958
Symbol
NCOR1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135455709 (NCOR1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zle01009
]
135455709 (NCOR1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135455709 (NCOR1)
Protein phosphatases and associated proteins [BR:
zle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135455709 (NCOR1)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
135455709 (NCOR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
135455709
NCBI-ProteinID:
XP_064585203
LinkDB
All DBs
Position
19:complement(7913201..7972523)
Genome browser
AA seq
2533 aa
AA seq
DB search
MSSSGYPPNQGAFSTEQSRFPPHSVQYSFPSSRHQQEFAVPDYRSSHLEVSQATQLLQQQ
QQQQLRRRPSLLSEFHPGSDRPQERRTGYEQQFHPGPSQTDHDSLESKRPRLEQVSDSHF
QRVSAATVLPLVHPLQEGLRSADIKKDPAFGGKHEGPSSPISGQPCGEDQNASPSKLSKE
ELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPEPERPLSPPPVEQKHRSIVQII
YDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYHENIKTNQVMRKKLILFFKRRNHA
RKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAKESKTREYYEKQFPEIRKQREQQERF
QRVGQRGAGLSATIARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMFDAEQRRVKFIN
MNGLMEDPMKVYKDRQFMNVWTDHEKEIFKEKFVQHPKNFGLIASYLERKNVPDCVLYYY
LTKKNENYKALVRRNYGKRRGRNQQQIARPSQEEKVEEKVEEEKSDKSEKKEEEKKDEEE
KDEKEESKENTKEKDKTEAAAEETEEREQAAPRGRKTANSQGRRKGRITRSMTNEAAQAN
AAAAAATEEPPPPLPPPPEPSSTEPVETSRWTEEEMEVAKKGLVEHGRNWAAIAKMVGTK
SEAQCKNFYFNYKRRHNLDSLLQQHKQKSSRRPREERDVSQCESVASTVSAQEDEDIEAS
NEEENPEDSEGAENSSDTESAPSPTPAEPAKPTEETPSEPAAPKVTTEAPAEQESAIKPA
ASTSPSLPAQSVTAAETQNPEPQVKEEINPEAEEPMEVDSRSHSAEAKPVITLPVHTKVE
PVETEMRLPENIQVKIESDTKEREMEKPKEKSEPEEMDYSLSQPVTAARPESHSDNDSSA
TCSADEEVDGEPDRQGIFSRESKPSLLNPTGSILVSSTIKQGQMDLQQLHHRAAVIPPMV
SCSPCSVPVGTPVSGYALYQRHIKAMHESALLEEQRQRQEQLDMEYRSAVSPCGTSKSPS
VEWEGKPVAYMPYAEVKRIEQEAQVQNAATRSASPYRLSPREVNKASPQPEMNAARYSVP
PVLQPAPHQVITNIPEGVRLPTTRPTRPPPPLIPSSKTSVPSEKPSFIMGGSISQGTPGT
YLTSHSQASYAQETAKPSVGSISLGLPRQQESAKSASLPYIKQEEFSPRSQNSQPEGLLV
RAQHESVVRGTTTIQEGSITRGTPTNKVSVETIPSLRGSITQGTPALAQPGIAADALLKG
TITRLATEDSSPEKCREEASAKGHVIYEGKSGHILSYDAIKNVREGTRSPRTAHEIGLKR
TYDTMEGNIKQGMSLRESPGSAPLEGLICRALPRGSPHAELKERTVLSGSIMQGTPRATA
ESFEEGLKYPKQIKRESPPIRTFEGAITKGKPYDGVTTIKEMGRSIHEIPRQDLLSQESR
KTPEMVQTSRPIIEGSISQGTPIKYESNSGQSAIKHNVKSLITGPSKLPRGMPQLEMVPE
NVKVVERGKYEDVKTGDAVRSRHTSVVSSGPSVLRSTLHETPKSQLSPGIYDDTNARRTP
VNYQSPMSRSSPMMNRVSEAGVSSGKSTNHERKNTLTPTQRESVPAKSPVPGVDPVVAHS
PFDPHHRGATPEVYRGHLPPHLDPAMPFHRALDPAAAAYLFQRQLSPTPGYPSQYQLYAM
ENTRQTILNDYITSQQMQVNLRPDVTRGLSPREQTLALPYAGARGIIDLNNMAPTILVPH
PGGTSTPPMERITYIPGTQLTFPPRPYNPASLSPGHPTHLAASAAANAEREREREREKER
ERERERERERERERERERERITSVPAELYLRPGAEQPGRPGSHGYVRSPSPSVRSQENIL
QQRPSIFQGTNGTSVITPLDPAAQLRIMQLTPGAPSITQGLPASRYNTAADALAALVDAA
ASAPQMEVAKAKESKHEGTRIEENMGRRSAVVTEQQQMEQKTLEVEKRPVQCPYTSANYS
GGKSQGQTSSVVYSEAGKEKGPPPKSRYEEELRTRGKTTITAANFIDVIITRQIASDKDA
RDRGSQSSDSSSSLSSHRYEAPGDAIEVISPANSPVPAQEKLQSYQQETPKPSQAETADP
SRPYEGPIHRYRTQQEPPSPQQPPPPSSQAEGMAHVPRTHRLITLADHICQIITQDFARN
QAASQASLQPPTTTFQNSSPAPTPASGRAKTSSRYSPEAQPQPVHHQRPGARVSPENLSD
KARGRPGKSPERSHVPSEPYEPISPPQVPVVHEKQENVLLLSQRTEPTEQRTDSRSPGSI
SYLPSFFTKLENTSPMVKSKKQEIFRKLNSSGGGDSDMATAQPGTEIFNLPAVTTSGAVS
SRGHSFADPASNLGLEDIIRKALMGNFDDKSEEHGVVMSQPLAVAPGSSGAAVPPTNETR
REEANPSPNSGGAVSKQKLIGKSNSRKSKSPIPGQGYLGTERPSSVSSVHSEGDYHRQTP
VWAWEDRPSSTGSTQFPYNPLTMRMLSSTPPTSIACAPPSMSQATTHPQNRIWEREPAPL
LSAQYETLSDSDD
NT seq
7602 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagttcaggctaccctccgaaccaaggagctttcagcacggagcagagccggttc
ccgccgcactcggtgcagtacagcttccccagcagccgccaccagcaggaatttgccgtt
cccgactatcgctcctctcacctggaggtcagccaggccacgcagctcctgcagcagcag
cagcagcagcagctccggcgccggccctcgctgctctccgagttccacccgggctctgac
aggcctcaggaaaggagaactggatatgaacagcagttccatccaggtccatctcagact
gatcatgattctctggagtccaagcgaccacgtcttgagcaagtgtctgattcccatttc
cagcgtgtcagtgcagccactgtcttgcctttagtgcatcctctgcaggaagggttgagg
tctgcagatattaagaaggacccagcttttggaggaaagcatgagggaccatcttctcca
atttctggtcagccttgtggggaggaccaaaatgcttcaccttccaagctgtcaaaggaa
gaattgatccagagcatggaccgcgtggatcgcgaaatcgccaaagtggagcagcagatc
ctgaaactgaagaaaaagcaacaacaacttgaagaggaagctgcgaagcctccggagccg
gagcggccgctgtccccccctcccgtggagcagaagcaccgcagcatcgtccagatcatt
tacgatgagaaccgcaaaaaagcagaagaagctcacaagatttttgaaggtcttggtcca
aaagttgaattgccactttacaaccaaccctcagacaccaaggtctaccatgaaaacatc
aaaacaaaccaggtgatgaggaaaaagctgatcctgttctttaaaagaaggaaccatgca
agaaaacaacgggaacagaaaatctgccaacgttatgatcagctgatggaggcgtgggag
aagaaagtggacaggatagaaaataatccacgcaggaaagccaaggagagcaaaacacgg
gagtactatgagaaacaattcccagaaatcaggaagcagagagaacagcaagaaagattc
caaagagttggccaaagaggggctggcctttcagcaaccattgccagaagtgagcacgag
atttcagaaatcatcgatgggctctctgagcaggagaataatgagaagcagatgcggcag
ctctctgtcatccctcccatgatgttcgatgccgagcagagaagggtgaagttcatcaac
atgaacgggctcatggaggatcccatgaaggtttataaggacaggcagttcatgaatgtc
tggacagaccatgagaaggagatttttaaggaaaagtttgtccaacatcccaagaacttt
ggtctaattgcttcctacttggaacgaaagaatgttcctgactgtgtattatattattat
ttgaccaagaaaaatgaaaattataaagcccttgtgcgaaggaattatggcaaacgcaga
ggaagaaaccagcaacagattgctcgtccttctcaagaagaaaaggtagaagaaaaagta
gaagaggaaaaatcagacaaatcagaaaaaaaagaggaggaaaagaaagatgaggaggag
aaggatgagaaggaagaatctaaagagaataccaaagaaaaggacaaaactgaagctgca
gcagaggaaacagaggagagggagcaggcagctcctcggggccgaaaaaccgccaacagc
caagggcggcgtaagggcagaatcaccaggtcaatgacaaatgaggctgcacaggcaaat
gctgctgcagctgcagccactgaagagccaccaccacctctgccacccccaccagaacct
tcttctacagagcctgtggagacatcccgctggacagaagaagaaatggaggttgctaag
aaaggtttggtggaacacgggcgaaactgggcagcgattgccaaaatggttgggacgaaa
agtgaagctcagtgtaagaacttctacttcaactacaaaaggagacacaacctggacagt
ctcctccagcagcacaaacagaagtcttcgcgaaggccccgagaggagcgagatgtgtcc
cagtgtgagagcgtggcttccactgtgtcagctcaggaggatgaggacattgaagcatcg
aatgaagaagagaacccagaagacagtgaaggtgctgaaaatagttctgatacagaaagt
gctccatctccaactccagcagaacctgctaaaccaactgaagaaactccatctgagcct
gctgctccaaaagtaaccactgaggccccagcagagcaggaatctgccattaaacctgca
gccagcacatctccctccttaccagcccaaagtgtaacagcagctgaaactcagaacccc
gagccccaggtcaaggaagaaataaaccctgaggctgaggagcctatggaggtggacagt
aggagccattcagctgaagctaagcccgtgattactcttccagttcataccaaagtagaa
cctgtagagactgaaatgaggctaccagagaatattcaagtgaaaatagagagtgatacc
aaagagagagagatggagaaacccaaggaaaagtcagaaccggaggaaatggactacagc
ctgtcccagccagtgactgcagccagaccagagtcccattcagataatgactccagtgcc
acctgcagtgctgatgaggaagttgatggagaacctgacaggcagggtatcttcagcagg
gagtcaaagccctcactgttaaatcccactgggtcaatcctggtatcatccacaataaag
caagggcagatggacctgcaacagcttcaccaccgagctgctgtcatcccacctatggtt
tcctgcagcccctgctctgtccctgtgggcaccccagtcagtggttatgccctgtaccag
aggcacatcaaggccatgcacgagtcagccctgctggaggagcagcggcagcgccaggag
cagctggacatggaatatcggagtgctgtgagcccctgtggcacctccaagagccccagt
gtggagtgggaaggaaaaccagtggcctatatgccttatgctgaggtcaagagaatagaa
caggaagcacaagtgcaaaatgcagccacaaggtcagcatcaccctacaggttatctcca
agagaagtcaataaagcctctccccagcccgagatgaatgcagctcgctacagtgtccct
ccagttctccagccagcccctcaccaggtgataaccaatattcctgaaggagttcgcctg
cccacaaccagacccaccagacctccaccacctctcattccatcctccaaaaccagtgtg
ccatcagaaaaaccttccttcatcatgggaggctcaatctcacaaggaacacctggcact
tatttaacatcccacagtcaagcttcctacgcccaagaaactgcaaagccatcagtgggt
tcaatatcccttgggctgccaaggcagcaagagtcagccaaatctgcttctctgccctat
atcaagcaagaagaattctcacccagaagccagaattcccaacctgagggactcctggtc
agggcacagcatgaaagtgtggtgagaggtaccacaacaatacaggaggggagcataaca
cgaggaactccaaccaataaagtttcagttgagaccattccttctttgagaggctccata
actcagggtaccccagctctggcccagcccggcatcgccgccgacgcgctgctgaaggga
accatcacccgcctggccaccgaggacagcagccccgagaagtgcagggaggaggcctca
gccaagggccatgtcatttatgaaggcaaaagtgggcatattctgtcttatgatgctatt
aaaaatgtccgtgaaggaacaaggagtcccagaactgctcatgaaattggtttaaagaga
acctatgatacaatggaaggaaatataaagcaggggatgtctctgagggagtctccaggg
tctgcaccactggaaggtttaatctgccgagcgctgcctcgggggagcccacacgctgaa
ctaaaggagagaacagttttgtctggctctataatgcaaggcacaccaagggcaacagct
gaaagttttgaagaaggtttgaagtaccccaagcagatcaagagggagtcacctcccatc
aggacgtttgaaggagccatcaccaagggcaagccctacgatggggtcaccaccataaag
gagatgggtcgctccatccacgagatccccaggcaggacctcctaagccaagagagtcgc
aaaactcctgaaatggtgcagacaagcaggccaatcatagaaggctccatatctcagggc
acacccataaaatatgaaagcaactctggccagtctgccatcaaacacaatgtaaaatct
ttaatcactggaccaagcaagctgccccggggaatgcctcagctggaaatggtgccagaa
aacgtgaaggtggtggagcgaggaaaatacgaagatgtgaagaccggggatgccgtgcgg
tcccgtcacacgtccgtagtcagctctggtccctctgttctcaggtcaacccttcatgaa
actcccaaatcacagctgagccctgggatttatgatgatacaaatgctcggaggacacct
gtgaactatcagagtcccatgtccaggagttcacccatgatgaatagagttagtgaggct
ggagtatcttctgggaagtcaacaaatcatgaaaggaagaacacactcactccaacacag
agggagagtgtgccagcaaaatctccagtgccaggggttgatcctgtagtggctcacagc
ccttttgaccctcaccacagaggagcaactcctgaagtctacaggggtcacctccctccc
catttagatcctgctatgccatttcacagggctctggatcctgctgctgctgcttacctg
ttccaaaggcagctgtcccccacgccggggtaccccagccagtaccagctgtacgccatg
gagaacacgcgccagaccatcctcaacgactacatcacctcccagcagatgcaggtcaac
ctgcggcccgatgtcaccaggggcttgtcccccagggagcaaactctggcactcccttat
gcaggagcacgaggaatcattgacctgaacaatatggcccccacgatcttagtgcctcat
cctggaggaaccagcaccccacccatggagagaatcacgtacatccctggcacccagctc
accttccctcccaggccttacaaccctgcttctctgtcaccaggacaccccacacacctg
gcagcttctgcagctgcaaatgctgaaagggaacgggaaagggagagggagaaggagcgg
gaaagagagagggaacgtgaacgagagcgggaaagagaacgggaacgagagagggagaga
atcacctcagtccctgctgaactttatctccgaccaggtgcagagcagcctggcagaccc
ggcagtcacggatacgtccggtccccatccccctctgtcagaagccaggaaaacattctg
cagcaaaggccaagtatattccaaggaaccaatgggacaagtgtaatcacacctttggat
cctgctgctcagctacgtatcatgcagctcacccctggagctccctctatcactcaaggc
ttgccagcttcccgttacaacactgctgctgatgccctggcagccctcgtggatgctgca
gcctctgctcctcagatggaagttgccaaagcaaaggagagcaagcacgaaggaaccagg
atagaggagaacatgggccgcaggtcagctgtggtgactgagcagcagcagatggagcag
aagaccctggaggtagaaaagaggcctgtgcagtgcccctatacctctgccaattactct
ggtggcaagtcccagggacagacttcatcagtagtctattcagaggctggtaaagagaaa
ggacctcctcctaaatccaggtacgaggaagagctgagaactcgaggaaagaccacaatt
actgctgctaacttcatagatgtgatcatcactcgccagattgcttcagacaaggatgct
cgagataggggctctcaaagttcagattcttccagtagtttgtcctcacaccggtatgaa
gctcctggagatgccattgaggtgatcagccctgcaaattcacctgtacctgctcaagaa
aagctgcagtcctatcaacaagagacacccaaaccaagccaggcagagacagctgacccc
agcaggccctacgagggccccattcaccgctacaggacacagcaggagcccccctcaccc
cagcaacctccacctccctcttcccaggcagaggggatggcccacgtgcccaggacccat
cggctcatcacccttgctgatcacatctgtcaaattatcacacaagactttgctagaaac
caagcagcttctcaggcctctttgcagcctcccaccactacattccagaattccagccct
gctccaactcctgcttctggccgggcaaagacctcgagccgctacagccccgaggcgcag
ccccagcccgtgcaccaccagcggccaggggccagagtgtcccctgagaacctctctgac
aaggccaggggaaggcctggaaaatctccagagaggagtcatgtcccctcagagccctac
gagccaatctcgccacctcaggtcccggttgtacacgagaaacaggaaaatgttcttttg
ctttcccaaagaactgagcctactgaacagaggactgactctcgctctccaggcagtatc
agttacctgccttcgtttttcaccaaacttgagaacacttcaccaatggtcaaatccaag
aaacaggagatatttcgaaagctgaactcatctggtggaggtgactctgacatggcaact
gctcagccagggactgaaatattcaatttgccagcagtcactacctcaggtgcagtcagt
tcgaggggtcactcctttgcagatcctgccagtaatctgggtctggaggacatcattagg
aaagcactgatggggaactttgatgacaagagtgaggagcacggggtggtcatgtcccag
cctctcgccgtggccccgggcagctccggcgccgcggtgccgccgactaacgagacacgg
agggaagaagccaatccatctccaaattcaggtggggcagtcagcaagcagaagctcatc
ggcaagtcaaacagtcggaagtcaaaatctccaattcctgggcagggatatttgggaact
gaaagaccttcttctgtctcatctgtacattcagaaggggactaccacagacagactcca
gtgtgggcctgggaagacaggccttcatcaacaggttccacccagtttccatacaaccct
ctgaccatgaggatgctgagcagcacccccccgacctccatcgcctgtgcccccccgtcc
atgagccaagcaaccactcacccacagaacaggatctgggagcgagagcctgcaccactg
ctttcagcacaatatgagactctgtctgacagtgatgactga
DBGET
integrated database retrieval system
