Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455717
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Entry
135455717 CDS
T09958
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zle03009
]
135455717 (DDX52)
Enzymes [BR:
zle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
135455717 (DDX52)
Ribosome biogenesis [BR:
zle03009
]
Eukaryotic type
90S particles
Helicases
135455717 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
135455717
NCBI-ProteinID:
XP_064585218
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Position
19:complement(10376722..10382646)
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AA seq
615 aa
AA seq
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METHELFRRLGAGARFDVRRFGLDARRFGVVKGNRGSVSLENLDFFGSKEGEPQGAAGEG
RGLAGAEEEVKQQNDGAGKNDGKRKRTAESSEGKRKKKKARGAVSMPELSENNGIKWMSS
LEAKIEDAKEKKPTAEKLERLRREKINRFRHQHRISIQGTDLPDPIATFEQLQEEYKVHP
KILENIQAAGFHVPTAIQMQAIPVMLHGRELLASAPTGSGKTLAFCIPLLTHLKQPRNKG
FRALIISPTRELASQTHRELVKLAEGTGFRIHMIHKAAEAAKKFGPKSSKKFDILVTTPN
RLIYLLKEDPPAIDLSSVEWLVVDESDKLFEDGKSGFREQLGTIFLACTSHLARRALFSA
TFAHDVEEWCKLNLDNLVLVSVGARNSAAETVEQELLFVGSETGKLTAMRELVKKGFAPP
VLVFVQSIERAKELFHELIYEGINVDVIHADKTQQQRDKVVQSFRAGKIWVLICSALLAR
GMDFKGVNMVINYDLPTSAVEYIHRIGRTGRAGHRGKAVTFFTEDDKPLLRSIANVIQRA
GCPVPEYIKHLPKLQSKQKKKFIKKPLTRESICTTPKCFLKKDKRKMKTTKENTKGKKKG
KEDKNGSKLQTVAES
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggagacccacgagctgttccgccgcctcggagccggcgctcgcttcgacgtgcggcgc
ttcgggctcgacgcgcggcgcttcggggtggttaaagggaaccgcggcagcgtctcgctg
gagaacctcgacttcttcgggagcaaggagggagaacctcagggagctgccggggagggc
aggggactcgcaggggctgaagaggaggtgaagcagcagaacgatggagcagggaagaac
gatggaaagaggaaaagaacggcagaaagtagtgaagggaaaagaaaaaagaaaaaggca
cgaggagcagtatcaatgccagagctgtcagaaaacaatggaataaagtggatgtcctct
ctggaagcaaaaattgaagatgcaaaagagaaaaagcccactgcagagaagcttgaacgc
ttgaggagagaaaagatcaatcgcttcaggcaccagcacaggatcagcatccagggaaca
gatctccctgaccccattgccacctttgagcagcttcaggaggagtacaaagtgcaccct
aagatcctggagaatatccaggctgcaggcttccacgtccccacagccatccagatgcag
gcaatccctgtcatgctgcacggtcgggagcttctggcttcagctcccacagggtctggg
aaaacactggcattttgtatccctctcttaacacatctgaaacagcccaggaacaaagga
ttcagggctctgatcatatctcccacccgagaacttgccagccagacccaccgggagctg
gtgaagctggcagagggcacaggcttcagaatccacatgatccacaaggcagctgaggca
gccaagaagtttgggcccaagtcttccaagaaatttgatatactggttactactcccaac
agactcatttatctgctgaaagaagatcctccagccatagacttgagcagcgtggagtgg
ctggtggtggatgagtcagacaagctgtttgaggatggcaagtcaggattcagggagcag
ctgggcacaatcttcctggcatgcacctcccacctggccaggagggccctgttcagcgcc
acctttgcccacgacgtggaggagtggtgtaagctcaacctggacaacctggtgctggtg
tctgttggggcaagaaactctgcagcagagacagtagaacaagagctgctgtttgttgga
tctgagacaggaaagctaacagcaatgagagagcttgttaaaaagggttttgctcctcca
gtccttgtttttgtacagtctattgagagggctaaagagcttttccatgagctgatttat
gaaggcatcaatgtggatgtcatccatgcagacaagactcagcaacagagagacaaagta
gtgcagagtttcagagctgggaagatctgggtgctcatctgctctgcgttactggctcga
gggatggacttcaaaggtgtgaacatggtcatcaattatgatttgccaaccagtgcagtg
gaatacatccacaggataggtcgtactggaagagcaggacacagaggaaaggcagtcact
ttcttcacagaagatgacaaacctttattacgcagcattgccaacgtgatccagcgagct
ggctgtcctgtgccagaatacataaaacatttgcccaaactgcagagcaaacaaaagaag
aaattcattaagaaacctttgacaagagaatccatttgtaccaccccaaagtgcttcttg
aaaaaagacaaaagaaaaatgaaaaccacaaaggaaaatactaagggaaagaagaaaggt
aaagaagacaaaaatggcagtaaattacagactgttgcagaaagctga
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