Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455746
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Entry
135455746 CDS
T09958
Symbol
CLDN3
Name
(RefSeq) claudin-3
KO
K06087
claudin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03272
Virion - Hepatitis viruses
zle04382
Cornified envelope formation
zle04514
Cell adhesion molecule (CAM) interaction
zle04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
135455746 (CLDN3)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135455746 (CLDN3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135455746 (CLDN3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135455746 (CLDN3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zle03037
]
135455746 (CLDN3)
04147 Exosome [BR:
zle04147
]
135455746 (CLDN3)
Cilium and associated proteins [BR:
zle03037
]
Other cilia and associated proteins
Stereociliary proteins
135455746 (CLDN3)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
135455746 (CLDN3)
Exosomal proteins of colorectal cancer cells
135455746 (CLDN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
TMEM37
CdpA_N
TMEM_230_134
CyanoTRADDas_TM
DUF418
Borrelia_P13
Motif
Other DBs
NCBI-GeneID:
135455746
NCBI-ProteinID:
XP_064585269
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All DBs
Position
19:complement(716696..717446)
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AA seq
214 aa
AA seq
DB search
MSMGLEIGGVALSVLGWLCSIICCALPMWKVSAFIGNNIVTAQIIWEGLWMNCVVQSTGQ
MQCKVYDSMLALPQDLQAARALLVVAIILAVLGLMVAIVGAQCTRCVEDESTKAKITIVS
GVIFLLSGVLTLIPVCWSANTIIRDFYNPLVIEAQKRELGTSLYVGWAASALLLLGGGLL
CCSCPPKDDRYPTSKVAYSAPRSAVTSYDKRNYV
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatggggctggagatcggcggcgtggccttgtcggtgctgggttggttgtgcagc
atcatctgctgcgcgttgcccatgtggaaggtgtcggccttcatcggcaacaacatcgtg
acggcccagatcatctgggaagggctgtggatgaactgtgtggtgcagagcacggggcag
atgcagtgcaaggtctacgactccatgctggcgctccctcaggacctgcaagccgcccgc
gccctgctggtggtggccatcatcttggccgtgctgggcttaatggtggccatcgtgggc
gcccagtgcacccgctgcgtggaggacgagagcaccaaagccaagatcaccatcgtctcc
ggcgtcatcttcctcctctctggcgtcttgaccctcatccctgtctgctggtcggccaac
accatcatccgggatttctacaacccgctggtgatcgaagcgcagaagcgggagctgggc
acctcgctctacgtgggctgggcggcctccgcactcctgctgctgggggggggcctgctc
tgctgctcctgcccccccaaagacgacaggtaccccacaagcaaggtggcctactccgcc
ccacgctccgccgtcaccagctacgacaagaggaactatgtctga
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