Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455758
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Entry
135455758 CDS
T09958
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135455758 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135455758 (RNF43)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135455758 (RNF43)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135455758 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
KIAA1549
DUF2254
Motif
Other DBs
NCBI-GeneID:
135455758
NCBI-ProteinID:
XP_064585288
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All DBs
Position
19:complement(574824..631571)
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AA seq
826 aa
AA seq
DB search
MSAGPQVQLAVLWPWLLMATLQAGLGHTGLALAAAVESERAAAQKAIIRVIPLKVEPIIL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTLQAIGQLATR
RYQPRARPAPRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSGDQAMAASSRLVPQDMEPGRRLHLFRQHPGHALYHLPQAYPQRNLRS
FPPESAHGNPFFHSPELSQLDFGTIHYMPYRPATSLLACGHVSPLAPGLLGQQHPNPSAC
GQVLAPHRTCPLQPQPPCVVPKAAVAQKQHRAPTLRRGLGHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
TMDHGQEQLRLPRDRRPRSLDLMVPQGAALAKPQVLSHVHYHHHQHHHYRQDSECPPGRA
GQGPGPRKSRYSGAKVALHSARTQKRTEKSHHSQQPLESSAVLQEAAPAGQPACPQEGQE
PRHTPSTSPNRLDFSVDANRQLGAVPLSPRHSLQSRHHRRKRKCPLELDPALLPKDLAEP
GACGAPLPPGHPAGSRCSPEAQPLIPSAALPSGSQPLWKCLVPQPSSELRKQEQRLSGRE
RNRSVPGDVSGTCTPRHSLSVRLHCPSQQGGQESEEEVQDVHEHSV
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccaggtgcagctggctgtcctctggccttggctgctcatggcgacc
ctgcaggcaggactgggccacaccgggctggcgctggcggcggccgtggagtcggagcgg
gcggcggcgcagaaagccatcatcagggtcatcccgctcaaagtggagcccatcatcctg
gaaggggagttcgccaacgtcgccgaggtgactccggccgaagggaaactgctccagtcc
cacccactatccctgtgcaacaccagcgaggatgaacacacagagtcgggattcatcacc
atcgtcaagctggagcagccggaccgggatcccaacccctgcctgtccctggccaacaag
gcaaagctggcgggggagcgtggagcccgtgcaatcctttttgacatcaccgatgatgaa
agtgctgctgatcagctgaggaagcccagaggcctgagccagcctgtggtcctaatcagg
ggccatgatgctgagctcctcatgggcgttgtgaacaagaacagagaggcccacgtgaag
atagaggtcaaggagccaccagcttggccagactacgatgtgtggattcttctcacagtg
gtcagcactgtggtcgtcataattttgatttttgttgtccgcacaaagtgccagctgaac
aggactcaggactcggtgcagcagcagaccctgcaggccatcgggcagctggccacgcgc
cgctaccagccccgggcacggccggccccgcgctgggactcggccagcagctgcagctcc
gccccggtctgtgccatctgcctcgaggagttcagcgagggccaggaactgcggatcatc
tcgtgctcccacgagttccatcgggagtgtgttgacccttggctgcagcaacaccacacg
tgtccactttgcatgttcaatattcttgccagagactcaggggaccaggccatggctgcc
agctccaggctggtccctcaggacatggagccggggcggcgactccaccttttccgccag
catccaggacatgccctttaccacctcccacaagcatatcctcagaggaacctcaggagc
tttcccccagagtcagcccatggcaaccccttcttccactctccagagctctcccagttg
gattttggcaccatccactacatgccctacagaccagccacctccctgctggcctgtggc
cacgtgtccccgctggccccaggcttgctggggcagcagcaccccaacccctctgcatgc
gggcaggtgctggcaccccacaggacatgtccccttcagcctcagcccccctgtgtggtg
cccaaggcagccgtggcacagaagcagcaccgtgcgcccaccctgcgccgagggcttggc
cacgggcaccagcacaacagcagtggctctggggagagctatctcacggagcacagtggg
tacctggctgacgggccgggcagcgactccagctcggggccctgccacggctcctccagt
gactccatgttgaactgcacggacgtcagcctgcagggcatccatggcagctgctccacg
ttccgcagctccctcagcagtgactatgaccccttcgtgtactgcagctccgagggcccc
accatggaccacgggcaggagcagctgcggctgcccagggacaggcggccccggtccttg
gacctgatggtgccccagggggctgctctggccaagccccaggtgctcagccacgtccac
taccaccaccaccagcaccaccactacaggcaggactcagagtgtccccctgggcgagcg
gggcaggggcctgggccacgcaaatcccggtattccggggccaaggttgccctccacagt
gctcggacacaaaagagaactgagaaaagccatcactctcagcagcctctggaaagcagt
gccgtgctgcaggaggcagctccagcaggccagccagcctgtccccaggaaggccaggag
ccccgtcacaccccctccacttctccaaacaggctggacttcagtgtagatgccaacaga
caattgggagctgtcccactgtcccccagacacagcttacagagcaggcatcaccgaagg
aaaagaaagtgtcccctggagctggaccccgctctcctgcccaaggacttggccgagccc
ggagcctgtggcgctccccttcctcccggccatcccgctggctcccgctgctctcccgaa
gcccagcccctgatcccaagcgctgccctgcccagcggctcccagcccctctggaagtgt
ttagtgccacagcccagctctgagctgaggaagcaggagcagaggttgtcaggacgggag
agaaaccgctcagttcctggggatgtctcagggacgtgcacccccaggcacagtctgagt
gtccgccttcactgcccatctcagcagggtggtcaggaatctgaagaggaggtccaggat
gtccatgaacactcagtttaa
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