Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455759
Help
Entry
135455759 CDS
T09958
Symbol
HNF1B
Name
(RefSeq) hepatocyte nuclear factor 1-beta isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135455759 (HNF1B)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
135455759 (HNF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
Homeodomain
Homeobox_KN
APP1_cat
Motif
Other DBs
NCBI-GeneID:
135455759
NCBI-ProteinID:
XP_064585289
LinkDB
All DBs
Position
19:complement(10388734..10409651)
Genome browser
AA seq
556 aa
AA seq
DB search
MVSQLSALQRELLGALLSSGATKEGLIRALEDMVPAAGFGVKLESLPLSPGGPPDGRAAL
PPLANGHGKGKLSGDEGSEDGDDFDTPQILRELQSLNTEEAVEQRAEVERMISEDPWRAA
KMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTQKRAALYTWYVRKQREILRQ
FNQAVQGCGNMTDKGSQDQLLFLFPEFNQQNQGAAQLDDACSETPSKKMRRNRFKWGPAS
QQILYQAYERQKNPSKEERETLVEECNRAECLQRGVSPSKAHGLGSNLVTEVRVYNWFAN
RRKEEAFRQKLAMDAYSSGQPPHSMNLLLSHGSPHHNQPSASPPSKMPGVRYSQAGGEAV
SSGAISHHGGAAMVTTSQAVLQQVSPASLDPGHALLSPEGKMISVSGGGLPPVSTLTNIH
SLSHHNAQQSQNLIMTPLSGVMAIAQSLNTSQAQSVPVINSVAGSLAALQPVQFSQQLHS
PHQQPLMQQSPGHMAQQPFMATVTQLQNSHMYTHKQEPPQYSHTSRFPSAMVVTDTSSIS
TLTNMSSSKQCPLQAW
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggtgtcccagctgagcgccctgcaacgggagctgctgggcgccctgctcagctccggc
gccaccaaggaggggctgatccgcgccctggaggacatggtgcccgccgccggcttcggc
gtcaagctggagagcctgccgctgtctccgggcgggccccccgacggcagggccgcgctg
ccgccgctggccaacgggcacggcaagggcaagctctcgggcgacgagggctccgaggac
ggcgacgactttgacacgccgcagatcctccgcgagctgcagtcgctcaacacggaggag
gccgtggagcagcgggcggaggtggagaggatgatcagcgaggacccgtggcgggcagcg
aagatgatcaagggctacatgcagcagcacaacatcccccagagggaggtggtggatgtc
accggcctcaaccagtcccacctgtcccagcacctcaacaagggcacccccatgaagacc
cagaagagagctgccctgtacacgtggtacgtccgcaagcagcgggagatcctccgccag
ttcaaccaggcagtccagggttgtggaaatatgacagacaaaggcagtcaggatcagctg
ctgtttctctttccagagttcaatcagcagaaccagggggctgcccagctcgacgacgcc
tgctccgaaacgcccagcaagaagatgcggcgcaatcggttcaagtgggggccggcctcc
cagcaaatcttgtaccaagcctacgagcgccagaagaacccgagcaaggaggagagggag
accctggtggaggagtgcaacagggccgagtgtctgcagcgaggagtgtccccctccaag
gcgcacgggctgggctccaacctggtgacggaggtgcgggtgtacaactggtttgccaac
cggcgcaaggaggaggcgttccgccagaaactggccatggatgcctacagctcgggccag
cccccgcacagcatgaacctgctgctgtcccacggctccccccaccacaaccagcccagc
gcctccccgcccagcaaaatgccaggggtcaggtacagccaggcgggcggcgaggccgtg
tcctcgggggccatcagccaccacggcggcgctgccatggtcaccacgagccaggctgtg
ctgcagcaggtctccccggccagcctggacccgggccacgctctgctgtctcccgaaggg
aaaatgatctcggtgtcggggggcgggctgcccccggtgagcaccctgaccaacatccac
agcctgtcccaccacaacgcgcagcagtcgcagaacctcatcatgacgccgctctcgggg
gtcatggccatcgcccagagtctgaacacctcgcaggcccagagcgtccccgtcatcaac
agcgtggcgggcagcctggcagccctgcagcccgtgcagttctcccagcagctgcacagc
ccgcaccagcagcccctgatgcagcagtccccgggccacatggcacagcagcccttcatg
gccacggtcacccagctgcagaactcacacatgtacacacacaagcaggagcccccccag
tactcgcacacctcgcgcttcccctcggccatggtggtgacggacaccagcagcatcagc
acgctcaccaacatgtcctccagcaagcagtgtcccctgcaagcctggtga
DBGET
integrated database retrieval system
