Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455801
Help
Entry
135455801 CDS
T09958
Symbol
VPS53
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135455801 (VPS53)
Membrane trafficking [BR:
zle04131
]
Protein recycling
Others
EARP complex
135455801 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
135455801 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
FBF1
Sec8_N
GrpE
Laminin_II
O_Spanin_T7
hAT-like_RNase-H
NBD94
COG3_N
Syndetin_C
COG5_N
MCPsignal
FUSC
VPS51_Exo84_N
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
135455801
NCBI-ProteinID:
XP_064585346
LinkDB
All DBs
Position
19:8401873..8466987
Genome browser
AA seq
837 aa
AA seq
DB search
MEEDEPELEAGLEAALELAPAVQAAIEQVFPSQDPLDRADFNAVEYINALFPTEQSLANI
DEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEKS
EQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQGV
VNVLEHFNKYMGIPQIRQLSERVKAAQNELGQQILADFEEAFPSQGTKRTGGPSNVLRDA
CLVANVLDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKINVKXSMXN
QLXLRESKTARMFPQVVQTSAPVDFCHITRAELSKIMRTRAKEIEVKLLLFAIQRTTNFE
GLLAKRFSGCTLADGTGKKPEVPPPSTNPFLEDETGPETDEIVMEKSDTDKPKKPKVPDN
PFHGIVSKCFEPHLYVYIESQDKNLGELIDRFVADFKAQGPPKPNVDEGGAVLPSCADLF
VYYKKCMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTITSLLKE
KEGSEVAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDTSLMERINLTGEMDTFS
IVISNSIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDN
LASTRKYFTQFCIKFANSFIPKFINHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGS
QVVRKAPASYTKIVVKGMTRAEMILKVVMAPHEPPVVFVDNYIKLLADCSTDTFQKILDM
KGLKRSEQSSMLDLFRLRLPSPPPGGDGSGSLSLSAPTPEQESSRIRKLEKLIKKRL
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggacgagccggagctggaggccgggctggaggcggcgctggagctggcgccc
gccgtgcaggccgccatcgagcaggtatttcccagccaagatccactggacagagcagat
ttcaatgctgtggagtatattaatgctctctttcccactgagcaatctttggcaaacatt
gatgaagtcgtgaacaagatcaggttgaaaataaggaggttggatgacaacatcagaact
gtggtgaggggccagaccaacgtgggacaggatggcaggcaggccctggaagaagcccag
aaagccattcaacagctctttggtaaaattaaggatattaaagacaaggctgaaaaatct
gaacaaatggtgaaggaaatcaccagggacatcaagcagctggaccatgccaagcgtcac
ctgaccacctccatcaccaccctcaaccacctgcacatgctggcaggaggggtggattct
ctggaggctatgaccaggaggagacaatatggggaggttgccaaccttctgcaaggtgtg
gtgaatgtgttggagcacttcaacaaatacatggggatccctcagattcgacagctctct
gaaagggtgaaggcagcacagaacgagttggggcagcagatcctggctgacttcgaggaa
gcctttccttcccaaggtacaaagaggactggtgggcccagcaatgtcctacgtgatgcc
tgcctggtagccaacgtcctggaccccaggatcaaacaggaaatcatcaagaaattcatt
aaacaacacctctcagagtatctggtccttttccaggaaaatcaagatgtggcctggctg
gacaagattgaccggcgctatgcctggatcaagatcaatgtaaaataatcaatgtaaaat
cagctctgattgagagagagcaaaactgcacgcatgttcccgcaagtggtgcagacgagc
gctccagtggacttctgccacatcaccagggcagagctctccaagatcatgcgcaccagg
gccaaggagattgaggtgaaattgcttctgtttgcaattcagagaacaaccaactttgag
gggctcctggccaaacgcttctcaggctgcacccttgctgatggcacagggaagaaacca
gaggtgccacctccctccaccaacccctttctggaggatgaaactgggccagagacagat
gagattgtgatggagaaaagtgatacagacaaaccaaagaagccaaaggtccctgacaat
cctttccatggcattgtttccaagtgctttgagcctcacctttatgtgtacattgagtcc
caggacaagaatctgggggagctgattgacagatttgtggctgacttcaaggctcagggt
ccccccaagcccaacgtggatgaagggggagctgtgctgcccagctgtgctgacctcttt
gtgtactacaagaagtgcatggtgcagtgctcccagctcagcactggggagcccatgata
gccctgaccaccatcttccagaagtacctgcgggaatacgcctggaaaatcctctctgga
aacctgcccaagacaaccagcagcagtggtgggctcaccatcacaagtttgctgaaagaa
aaggaaggctctgaagtggccaagtttactttagaagagctctgcctcatttgcagcatc
ctgagcactgcagaatattgcctggccaccacccagcagttggaagagaagctcaaagaa
aaagtggacacaagcctaatggagagaatcaacctgacaggagagatggacactttcagc
attgtgatctccaacagcatccagctgttagtgcaggacctggatgcagcctgtgaccct
gccctgactgctatgagcaagatgcagtggcagaacgtggagcatgttggtgaccagagt
ccttatgtcacctcagtgatcctgcacatcaagcagaatgtccccatcatccgtgacaac
ctggcctccaccaggaagtatttcactcagttctgcataaaatttgcaaactccttcatt
cccaagttcattaaccatctcttcaagtgcaaacctatcagcatggtgggtgcagaacag
ctgctgctggacactcactctctgaagatggttctcctggatctgccctccattgggtcc
caagtggtgaggaaggctcctgccagctacacaaagatagtggtgaaaggcatgactcgg
gctgaaatgatcctgaaggtggtgatggctccacacgagcccccagttgtgtttgtggac
aattacatcaagctccttgctgactgcagcactgacacattccagaaaatcctcgacatg
aagggcctgaagaggagcgagcagagcagcatgctggacctgttccgcctgcgcctcccc
tctcctccccccggcggcgacggctccggctcgctctcgctgagcgctcccacgcccgag
caggaatcctcccgcatccgcaaactggagaagctcatcaagaagagactctga
DBGET
integrated database retrieval system
