Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455843
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Entry
135455843 CDS
T09958
Symbol
RFFL
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135455843 (RFFL)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
135455843 (RFFL)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
135455843 (RFFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
ARMET_C
Prok-RING_4
FYVE_2
zf-RING_5
zf-C3HC4_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
135455843
NCBI-ProteinID:
XP_064585407
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All DBs
Position
19:5606101..5638007
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AA seq
356 aa
AA seq
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MWASCCNWFCVDGSPEEMQPAPAARAQAYSNPGYSSFPSPTASEQSCKACGLHFDSSSSK
HICLDCKKNFCTSCSNQAEGGPLLCHLCQRFRATAFQREELIKMKVKDLRDYLALHEIST
EFCREKEDLVFLILGQQPAITQEDQIRTNTFNTSAREQQDFVSHPPASLASPTSHDESSV
SADPISSSEAQEHQQANGHVPPSPAENAAEEAAAEDEIQSSDSEDNLVLGRKASLSDLSS
VGDINALSVRQLKEILARNFVNYKGCCEKWELLERVTRLYREKDLQHLVLDTDDQPGGAG
PPSTEDNLCRICMDAAIDCVLLECGHMVTCTKCGKRMSECPICRQYVIRAVHVFRT
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcaagctgctgtaactggttctgtgtggatggctcccctgaggagatgcagccg
gcgccggcagcccgggcccaggcctactccaaccctggctacagctccttcccctctccc
acggcctctgagcagagctgcaaagcctgtgggctgcactttgacagctcctccagcaag
cacatctgcttggactgtaagaagaatttttgcacgtcctgctcaaaccaggccgagggt
gggcccctgctctgccacctgtgccagcgcttccgagccacggcttttcagcgggaggag
ctgatcaagatgaaggtgaaggatctgagagattatttggccctccatgagatttccaca
gagttctgtcgtgaaaaggaggacctggtattcctgatccttggccagcagcctgcaatt
acccaggaagatcagataagaacaaacacatttaataccagtgcccgtgaacagcaagac
tttgtgagtcaccccccagccagcctggcctctcctacctcacacgatgagtcctcagtg
tctgcagatcccatctcaagttcagaagctcaggaacaccaacaggccaatggtcacgtg
cctccaagcccagctgagaatgcagcagaagaagcagcagcagaggatgagatacagtcc
agtgactccgaggataacctggtgctgggcaggaaggcctccctgtctgacctgagcagc
gtcggggacatcaacgcgctctcggtgcggcagctgaaggaaatcctcgcccgcaacttc
gtcaactacaaaggctgctgtgagaaatgggagctgctggagagggtcactcgcctctac
agagagaaggaccttcagcatctagttttggacaccgacgatcaacctggtggtgctggg
ccccccagcaccgaggacaacctgtgcaggatctgcatggacgctgccatcgactgcgtg
ctgctggagtgcgggcacatggtgacgtgcaccaagtgcgggaagcgcatgagcgagtgc
cccatctgccggcagtacgtgatccgcgccgtgcacgtcttcaggacttag
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