Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455973
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Entry
135455973 CDS
T09958
Symbol
CUX1
Name
(RefSeq) homeobox protein cut-like 1 isoform X1
KO
K09313
homeobox protein cut-like
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135455973 (CUX1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
135455973 (CUX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
ATG17_like
Motif
Other DBs
NCBI-GeneID:
135455973
NCBI-ProteinID:
XP_064585614
LinkDB
All DBs
Position
19:4835874..5107741
Genome browser
AA seq
1557 aa
AA seq
DB search
MAANVGSMFQYWKRFDLQQLQRELDTTATILANRQDESEQSRKKLIEQSREFKKNTPEDL
RKQVAPLLKSFQGEIDALGKRSKEAEAAFLNVYKRLIDVPDPVPALDLGQQLQLKVQRMH
DIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKNQAENIALEKEQKLQ
NDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYDEETTAKADEI
EMIMTDLERANQRAEVAQREAETLREQLSSANKSLQLATQIQKAPDVEQAIEVLTRSSLE
VELAAKEREIAQLVEDVQRLQGSLTKLRENSSSQISQLEQQLTAKNSTLKQLEEKLKGQA
DYEEVKKELNILKSMEFAPSESSGAQDASKPLEVLLLEKNRSLQSENATLRITNSDLSGS
ARRKGKDQPESQRPATLPASPPSQLLRNAGEQASNTNGTHQFSPTGLSQDFFSSSLASPS
LPLASTGKFALNSLLQRQLMQSFYSKAMQEAGSTSMIFPTGPYSTNSISSQSPLQQSPDV
NGMAPSPSQSESAGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEI
LARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGRQRENPGQNLNRLFQEVPKRR
NGAEGNITTRIRTAESGSDEAIKSILEQAKRELQVQKTAEPAQPPSASSSGNSDDAIRSI
LQQARREMEAQQAALEPALKTPPLSQADISILSPKLVSTPAMSSVSSYSPLAISLKKHSS
VTDSSISALQNLSGLKKEPQEAPVLELHGISDSAQGMLRHVKNELGRGGVWKDHWWNTVQ
HERRNAALPEDIKVEEASGGKEKVSNQTRPDRSQLQGPSSSEYWKEWPNAESPYSQSSEL
SMTGASRSETPQNSPLPSSPIVSLSKPSKPSVPPLTPEQYEIYMYQEVDTIELTRQVKEK
LAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQCVL
PAQGQQQGQVLHSVTSLQDSLQQGCASSESTPKTSASCSPAPESPMSSSESVKSLTELVQ
QPCPAIETSKDGKSQESSEPPASESQSTTPLPLSGHSALSIQELVAMSPELDTYGITKRV
KEVLTDNNLVWLTSLKSIRRARKCAPNSALGQRLFGETILGLTQGSVSDLLARPKPWHKL
SLKGREPFVRMQLWLNDPNNVEKLMDMKRMEKKAYMKRRHSSVSDSQSCESSSAGIDYSQ
GASPQPQHQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHN
YRSRIRRELFIEEIQAGSQSQAGSSDSPSARSSRAAHSSEGDSCDGVDAEGPPEGKPSGP
EADEFSNAAAKSQGGPAEAAFEAGEEALRGARPSERAEPESLEDTDDEGRPRAAPRQSSP
PAPQQRQGDALETLPNSATEGDASTSAASTSVLTGESSYKSKESSEKISSVPSTSSTPGA
GSQKSNSLQSLFGFSEAASSRNTRDSSLRKKKAANLNNIIHRLEKAASREEAVEWEF
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaatgtgggatcgatgtttcaatattggaagcgctttgatttacagcagctg
cagagggagctcgataccacagcaacaatattggcgaaccggcaagatgaaagtgagcag
tccaggaaaaaactcattgagcaaagtcgtgagttcaagaaaaacactccagaggacctg
cgcaaacaggtagctccattgctgaagagtttccagggagagattgatgcattgggtaaa
cgaagcaaagaagcagaggcagccttcttgaatgtttataagagattaattgatgttcca
gatccagttccagccttggatttggggcagcagcttcagctgaaggtccaacgcatgcac
gatattgaaacagaaaaccagaaactgagggaaactctggaggaatacaacaaagaattc
gccgaggtgaaaaatcaggaggttacaataaaagcacttaaggagaaaatccgagaatat
gaacagaccctgaagaaccaagcagagaacatagcccttgaaaaggaacaaaagttacaa
aatgattttgcagagaaggagagaaaattgcaggagacccagatgtcgacagcctcgaag
ctggaggaggccgaacacaaagttcaagctctgcaaacagccttggaaaaaaccaggaca
gaactatttgatctgaaaacaaaatacgatgaagaaactactgcaaaggctgatgaaatc
gagatgatcatgacagaccttgaaagagcaaatcagagggcagaggtggctcagagagag
gcagagaccttaagggagcagctctcatcagctaacaaatctctccaacttgcaacacag
atccagaaggcacctgatgtggagcaggccatcgaggtgctgacccgctccagcctggaa
gtggagctggcggcgaaggagcgcgagatcgcgcagctcgtcgaggatgtgcagaggctc
cagggcagcctcaccaagctgagggagaactccagcagccaaatctcccagctggagcag
cagctgacagccaagaacagcacactcaaacaactggaagaaaaactgaaaggacaggct
gattatgaagaggttaagaaagaattaaatatattgaaatccatggagtttgcaccatct
gaaagctctggtgcgcaggatgcatccaagccgctggaggtgctgctgctggagaagaac
cgctcgctgcagtcggagaacgccacgctgcgcatcaccaacagcgacctgagcgggtca
gccaggagaaaagggaaagaccagcctgagagtcagcgtcctgcaaccttgccggcctcc
cctccttcccagttgctccgcaacgcgggggagcaggcttccaatactaatggtacacac
cagttctcaccaacgggtttaagtcaagactttttcagctcatccctggcgagccccagc
ttacccctggcctccacaggaaaatttgcactaaactctctcctccagcgacagctaatg
cagtccttctactccaaggcaatgcaggaagcaggaagcacaagcatgatttttccaaca
ggtccatacagcacaaactccatatcttcccaaagtccattacaacaaagcccggatgta
aatggcatggccccatctcccagccagtcagaaagtgctgggagcatctccgaaggcgag
gagatagacacggccgaaattgcacgtcaggtgaaagagcagttgatcaagcacaatatt
ggacagcggatatttggacattatgtgttgggactgtcacaagggtctgtgagtgagatc
ctggcccggccaaagccatggaataaactgactgtgagaggcaaggagccatttcataag
atgaagcagttcctgtcggacgagcagaacatcctggctcttcgcagcatccagggcaga
cagagagagaatccaggccagaacctgaacagactatttcaggaagtaccgaaacgaaga
aatggggctgaaggtaacataaccacacgaatccgaaccgcagagtctggctctgatgaa
gccatcaaatccatcctggaacaagccaaaagggagctgcaagtacagaaaacagctgag
ccggctcagccgccttctgcctctagcagtggcaattctgatgatgcaattcgatccatt
ctgcaacaagcccgacgggaaatggaggcacagcaggctgcccttgaacctgccttaaaa
acaccacctctatctcaagctgacatttctatcctgtcccccaaactagtgtctacacct
gcaatgtcttcggtttccagctattctcctttggccatatccctgaagaaacattcatct
gtcactgattccagtatctctgcattgcagaacctctctgggctcaaaaaggagcctcag
gaggcgcctgttttagagcttcatggaataagtgattctgcccagggtatgttgaggcat
gttaaaaatgagttgggacgtggtggtgtttggaaggaccattggtggaatactgtgcag
catgagagaagaaatgcagctcttcctgaagatataaaagttgaggaagccagtggtgga
aaagaaaaggtcagcaatcagactaggccagatcgtagccagctccaaggaccgtcttct
tccgagtattggaaagagtggccaaacgcggaatctccgtactcgcagagttctgaattg
agcatgactggggcgagtcgcagtgagacaccacagaatagccccctcccttcatcccct
atcgtgtccttgtccaagccatccaaaccttcggttcctccactgacacccgagcagtat
gagatttatatgtaccaggaggtggataccatagagctaacgcggcaggtcaaggaaaag
ctagcaaagaatggcatctgccaaaggatctttggggaaaaggtattggggctgtcccaa
ggaagtgtcagtgacatgctctccaggccaaagccatggagcaaattgacccaaaaaggc
cgagaaccatttattcgtatgcagctctggttgaatggtgagctgggacagtgtgtcctg
cctgcacaagggcagcaacaaggacaagtccttcactctgtgacatcattacaggattcc
ctacagcagggatgtgcaagctcagaaagtactccaaagacttctgccagttgcagtcct
gctcctgaatctcccatgagttccagtgaatcagtgaaaagcctgactgagctggtacag
cagccctgccctgccatagagacgagtaaggatggcaaatcccaggaatccagtgagcca
cctgcatctgaatcccaatccacgacccctctgccactctcaggccactctgcactcagc
atccaagaactggtggccatgtcccctgagctggacacctatggcatcaccaagagggtc
aaggaagtgctcacggacaacaatcttgtgtggctgacaagcctaaaaagcatcagaaga
gccaggaaatgtgccccaaactctgcattaggtcagcgtttgtttggggagacaatcctg
gggctgacccaaggctctgtgtcagacctgctggctcgccccaagccctggcacaagctg
agtctgaagggaagggagccctttgtccgcatgcagctgtggctcaacgatcccaacaac
gtggagaagctgatggatatgaaacgcatggagaaaaaagcctacatgaagcggcggcac
agctcggtcagcgacagccagtcctgcgagtcctcgtccgctggcatcgactacagccag
ggtgccagcccccagccccagcaccagctcaagaagcccagggtggtgctggcaccagag
gagaaagaagctctcaaacgagcctaccagcaaaagccatacccatcaccaaaaaccatt
gaggaactcgccacgcagctcaacttgaaaaccagcaccgtgatcaactggttccacaat
tacaggtcccgcatccgccgggagctgttcatcgaggagatccaagccgggagccagagc
caggccgggtcgagcgattccccttcggccagaagcagcagggcggcgcacagctccgag
ggggacagctgcgacggcgtggacgcggagggccctcccgaggggaagccgagcggcccg
gaggcggacgagttcagcaatgcggccgccaagtctcagggagggcccgccgaggcggct
ttcgaggcgggggaagaggcactgcgaggagccaggccctcggagagagcggagcccgag
agcctggaggacaccgacgacgagggccggcccagagcggcgccgcgccagagctccccg
ccggcaccgcagcagcgccagggagacgctctggagacactgccaaactctgccacggaa
ggggatgcctctacctcagctgcctccacctcagtccttacgggggagagctcctacaag
tcaaaagaaagttcagagaaaatctccagtgtgccaagtacgagctcgacgccgggcgca
ggctcgcagaaatccaactctctgcagagcttgttcggcttctcggaggcggcgagctcc
aggaacacgcgagacagctccctgaggaaaaagaaagcggccaacttgaacaacatcatc
catcgcttggagaaggccgccagtcgggaagaggccgtcgagtgggagttttga
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integrated database retrieval system
