Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455976
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Entry
135455976 CDS
T09958
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135455976 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zle04040
]
135455976 (TRPV1)
Ion channels [BR:
zle04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135455976 (TRPV1)
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GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PKD_channel
Motif
Other DBs
NCBI-GeneID:
135455976
NCBI-ProteinID:
XP_064585624
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Position
19:8110869..8122114
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AA seq
844 aa
AA seq
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MSSILGKMKKFGSFDMEESEVTDEHTDGEDSVQEAPDNPQGPLSSRVHPPKSNIFARRGR
FVMGDSDKDMAPMDSFCQMDHLMAPSVIKFHVNLERGKLHKLLSTDSITGCSEKAFRFYD
RRRIFDAVAQGNTKDLSDLLLYLNRTFKHLTDEEFKEPETGKTCLLKAMLNLHDGKNDTI
PLLLDIARKTGTLKEFVNAEYTDNYYKGQTALHIAIERRNMYLVKLLVQNGADVHARACG
EFFRKIKGKSGFYFGELPLSLAACTNQLCIVKFLLENPYQAANIAAEDSMGNMVLHTLVE
IADNTKDNTKFVTKMYNNILILGAKINPILKLEELTNKKGLTPLTLAAKTGKIGIFAYIL
RREIKDPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEILAYSSETPNRHEMLL
VEPLNRLLQDKWDRFVKHLFYFNFFVYTMHITILTAAAYYRPVQKNEKPPFTFGYSTGEY
FRVTGEILSVLGGLYFFFRGIQYFVQRRPSLRTLIVDGYSEVLFFVHSLLLLSSVVLYFC
GQELYVASMVFSLALGWANMLYYTRGFQQMGIYSVMIAKMILRDLCRFMFVYLVFLLGFS
TAVVTLIEDDNEGQETNISDYAKCCHLKRGRTSYNSLYYTCLELFKFTIGMGDLEFTENY
RFKSVFVILLVLYVILTYILLLNMLIALMGETVNKIAQESKSIWKLQRAITILDIENSYL
NCLRHSFRSGKQVLVGITPDGQDDYRWCFRVDEVNWSTWNTNLGIINEDPGYSGDLRRNL
SFSIKPGRVSGKHWKTLVPLLKDGEKRREEPHKPPEEVKLKPVLEPYFEAEDSEELKESI
PKSA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccatccttgggaaaatgaagaagtttggcagttttgacatggaggaatctgaa
gtgacagatgaacacacagatggggaggactctgtccaggaagcccctgacaacccccag
ggccccctcagctccagggtgcacccacccaaaagcaacatttttgcaagacggggccgc
tttgtgatgggggacagtgacaaggacatggctcccatggactccttctgccagatggat
cacctgatggcaccttctgtcatcaaattccacgtgaatttggagaggggcaaacttcac
aagctcctgtctacagattccatcacaggctgctcagaaaaagctttcagattttatgac
cgcagaaggatctttgatgctgtagcccaaggcaacacaaaggacctcagtgacctgcta
ctctaccttaacagaaccttcaagcatctcacagatgaggagttcaaagagcctgaaact
ggcaaaacctgtttactgaaagccatgctgaatctacatgatgggaaaaacgataccatt
cccttgctgctggatattgcaaggaaaactggaactctgaaggagtttgttaatgcagaa
tatactgacaactactacaagggccagactgctcttcacattgccatcgagaggaggaac
atgtacctggtgaagctcctggtccagaatggagcagatgttcatgccagagcctgtggg
gagttcttcaggaaaatcaaagggaaatctggcttttattttggagagctgcctttgtcc
ctggctgcctgcaccaaccagctctgcattgtgaaattcctcctggagaatccctaccag
gcagccaacattgctgctgaggactccatgggcaacatggtcctgcacacactggtggag
attgcagataacaccaaggataacaccaagtttgtgaccaagatgtacaataacatattg
atccttggtgccaaaattaatcccatcctcaagctggaagaactcaccaacaagaaaggg
ctgactcctttaactctggcagccaaaacagggaagatagggattttcgcttacatcctc
agacgggagatcaaagaccccgagtgcagacacttgtccaggaagttcactgaatgggcc
tatggacctgtccactcctctctttatgacctgtcctgtatagacacctgtgagaaaaat
tcagtgctggagatccttgcctacagcagtgagacaccaaaccgtcacgagatgctgctg
gtggagccccttaacaggctgctgcaggacaagtgggaccgctttgtcaagcacttgttc
tacttcaacttctttgtctacaccatgcacatcaccatcctcactgcagctgcttactac
agacctgtacagaagaatgaaaagcctcccttcacctttggttacagcactggggaatat
tttcgagtaactggagagatcctgagtgtactgggaggcctctatttttttttcagaggg
atccagtatttcgtgcagaggcgcccatcactgaggaccctgatagttgatggctacagt
gaggttcttttctttgtccactccctgctcctgctgagctctgtggtgctctacttctgt
ggccaggagctctacgtggcttccatggtgttctccctggccctgggctgggccaacatg
ctctactacacgcggggcttccagcagatggggatttactcggtcatgatcgccaagatg
atccttagggatttatgtcgcttcatgtttgtctatcttgtattcctcttgggattttcc
acagctgtggtgactttgattgaagatgacaacgaggggcaggaaacaaatatctctgac
tatgccaagtgctgccacttgaaacgaggccgcacctcctacaacagcctctactacacc
tgcctggagctcttcaaattcaccattggcatgggggacctggagttcacagagaattac
aggttcaagtctgtgtttgtcatcctgctggtgctctatgtcatcctcacctacatcctc
ctgctcaacatgctcattgcactgatgggggaaactgtcaacaaaattgcacaggagagc
aagagcatctggaaactccagagagccatcacaatcctggacattgagaacagctacttg
aactgtctgaggcactcgttccgctctgggaagcaagtcctggtggggatcacccctgat
ggccaagatgattacagatggtgcttcagggttgatgaagtgaactggtccacgtggaac
actaatctgggcatcatcaacgaagaccctgggtactctggggacctcagacgaaatctc
agtttctccattaagcctggcagagtttcagggaagcactggaaaacattggttccactt
ctaaaagatggagagaagaggagagaagagcctcacaagccaccagaagaagtcaaatta
aaacctgttttggagccttattttgaggcagaagattctgaggagttgaaagagtcaatt
ccaaagtcagcctaa
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