Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456135
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Entry
135456135 CDS
T09958
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zle03041
]
135456135 (RBM39)
Spliceosome [BR:
zle03041
]
Common components
Common spliceosomal components
General mRNP proteins
135456135 (RBM39)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
135456135
NCBI-ProteinID:
XP_064585890
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All DBs
Position
20:complement(13938234..13966839)
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AA seq
522 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagt
cgaagtcgaagccatgacagaaagaggagcagaagtaaggaacgcaaacggagccgagat
cgggaacggaaaaagagcagaagccgggaaaggaaacggagcagaagcaaagaacgcaga
cgcagccggtctaggagcagagaccgcagattcagaggccgctacagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgccgctctagaagcaaaagtcctttcagaaaagacaaaagccctgttagagaa
cctattgataatcttacccctgaagagagggatgctcgaacagtgttctgcatgcagttg
gctgcaagaattcgaccaagagacctggaagaatttttctctacagtagggaaggttcgt
gatgtgcgaatgatttcagatagaaattccagacgttcaaaggggattgcttatgttgaa
tttgttgatgttagttcagtgcccctggcaataggactgactggacagagagtcctgggt
gtacctatcatagtacaggcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatctgcagaagggcagtgctggtcctatgaggctctatgtgggatcattacacttcaat
ataactgaagatatgcttcgaggaatcttcgagccatttggcaggattgaaagtattcag
ctcatgatggacagtgaaactggacgctcaaaaggatatggattcattacgttctcagac
tctgagtgtgccaaaaaagccctggaacaactcaatggatttgagctggctgggagacca
atgaaagttggacatgtaactgagcgtactgatgcttccagtgctagctcatttttggac
agtgatgagttggaacggactggaattgatttgggaacaactggtcggcttcagttgatg
gcaagacttgcagaaggtactggtttgcagattcctccagctgcacagcaggctctgcag
atgagtggatctttggcctttggagctgtgacagatttacaaacgagactgtcccagcag
aatgaagttctggctgcagctgcttctgtacaaccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggacacagaaattaaagat
gatgtgattgaggaatgtaacaaacatggaggagttatccacatctatgttgacaaaaac
tcagctcagggcaatgtgtatgtgaaatgtccctccatcgctgctgccatcgcagctgtc
aatgctttgcatgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctctt
ccaacataccacagccttttcccagactctatgactgcaacccaactactggttcctgtt
cgacgatga
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