Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456144
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Entry
135456144 CDS
T09958
Symbol
RBL1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04110
Cell cycle
zle04218
Cellular senescence
zle04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135456144 (RBL1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135456144 (RBL1)
04218 Cellular senescence
135456144 (RBL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135456144 (RBL1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
135456144 (RBL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TFIIB
Motif
Other DBs
NCBI-GeneID:
135456144
NCBI-ProteinID:
XP_064585908
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All DBs
Position
20:14414783..14441742
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AA seq
1055 aa
AA seq
DB search
MSRPGAADPGAAVERLCRELNLDAASAAEALRDFTALRGTYSLEGEALHWLACALYVACR
RSRVPTVGSSPMEGNGVSLTRILRSARLSLIQFFSKMKKWMDMSNLPQEFRERVERLERN
FEVSTVIFKKFEPIFFDIFQNPFEESSKPHRSRKQRRVPCSVKDLFNFCWTLFVYTKGNF
RMIGDDLVNSYHLLLCCLDLIFANALLCPNRRDLLNPSFKGLPVESHTPEMKGSEDPPCI
IGTLCELHDGLLVEAKGIKEHYFKPYIAKLFDRKILKGDCLLDLCNFTENSKALNKEYEE
YVLTVGDFDERVFLGADAEEEIGTRKFPEDVPGEKTAARAHMECHLQQHFEKKRSFAPST
PLTGRRYLREKETAFTPVASATQSVSRLQSMVAGLKNAPSEQLTAIFESCARSPLESIMS
RVKEIGETFCCCYTQSTDEQPGSHIDFAVNRLKLAEILYYKILETIMVQETRRLHGKDLT
ALLEQDVFHRSLLACCLEIVLFAYSSPRTFPWIIEVLDIRPFYFYKVIEVLIRSEEGLSR
DMVKHLNSIEEQILESLAWTRNSALWNALEASENKVPTCEEVIFPSNFEASNGGSGFGHL
PMMPLSPIIHPRVKEVRTDLGGSLRRDVQPLSPISVHERYSSPTAGSAKRRLFGDDSPKE
TQMEKILMKGTKLTIAPASSIGAENMSASPAQTVLTMTTTTGPGKAGQKVTIPLHGISND
MGGITLIPISINLGQPCKVDAQAPCHPPGTQGADVALPVAGKPKRTGSLALFYRKVYHLA
SVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQLLLCAFYIMAKVTKEER
TFQDIMKSYRNQPQANSHVYRSVLLRNTSDDVPLDKNANPDMEMTEDSSVKAGSSLGRST
AENLSESETEERGDLIKFYNAVYVGRVKSFALKYDITNQDHVVEAPPLSPFPSLRPQAVS
PRRISQQHSVFVSPHKNKNGACLTPRSALLYRFNGSPSKSLKDINNMIKQGEHRSKKRAI
TIDSDTESPSKRLCQENDDVLLKRLQDVVSERANH
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcccgggggccgccgatcccggtgccgccgtggagcggctctgccgggagctc
aacctggacgcggcgagcgcggccgaggcgctgcgcgacttcacggcgctgcggggcacc
tacagcctggagggcgaagcgctgcactggttggcctgcgcgctgtacgtcgcctgccgc
cggagccgcgtgcccaccgtggggagcagcccgatggaggggaacggcgtctccctgacc
cgcatcctgcgctccgcacgcctcagtttaattcagttttttagcaaaatgaagaagtgg
atggacatgtcaaacctgccccaggaattccgagagcgagttgagaggctggagagaaat
tttgaagtgtcaactgtgattttcaaaaagtttgaaccaatattttttgatatatttcaa
aacccttttgaagaaagttccaaaccgcatcgaagcaggaagcagaggcgggtgccatgc
agcgtcaaagatctcttcaacttctgctggactctctttgtgtacactaagggtaatttc
cgtatgattggagatgatttagtaaattcctatcatttacttctgtgctgcttggacctg
atttttgccaatgcccttctgtgtccaaacagaagagatttgctaaatccatcatttaaa
ggcttaccagtggaatcccacactccggagatgaagggctctgaggatcctccctgcatc
attggcacgctctgcgagctgcacgacgggctcctggtggaggccaagggcatcaaggag
cactacttcaaaccttacattgcaaagctgtttgataggaagatcttaaaaggagattgt
ttattggatctttgcaactttacagaaaatagcaaagcactgaataaagagtatgaagag
tatgttctgaccgtgggtgactttgatgagagagttttcctgggagctgatgctgaagaa
gaaattggcactcgaaaattccctgaagatgtgccaggagagaaaacggcagcacgagct
cacatggagtgtcatctgcagcagcattttgaaaagaaaaggtcatttgcaccttcaacc
ccactgactggcaggagatacctgcgagagaaggaaactgccttcactcctgtggcctca
gccacacagagcgtgagccgtctgcagagcatggtggctgggttgaaaaatgcaccaagt
gaacaacttacagctatttttgagtcttgtgcccgcagtcccttggaaagcatcatgagc
agagtgaaggaaattggtgagaccttctgttgctgctacactcagtcaacagatgagcag
ccaggatctcacatagattttgctgtaaacagattaaaactggcagagatcttgtattat
aaaatcttggagactataatggtgcaagaaacacggagactgcatgggaaggatctgact
gctctcctggagcaggatgtctttcaccgctccctcctggcgtgctgcttggagatcgtg
ctcttcgcctacagctcccctcgcaccttcccctggatcattgaggtgctggacatcagg
ccattctacttctataaggttattgaagtgctgattcggtctgaggaagggctgtccaga
gacatggtgaagcacctcaatagcattgaggaacagattctggagagtctggcctggact
cggaactcagcactctggaatgcactcgaggcctcggaaaacaaagtcccaacctgtgaa
gaagtgatatttcccagtaattttgaggccagcaatggaggaagtgggtttgggcacttg
cccatgatgccattatctcccataattcatcctcgagtgaaagaggttcggacagatctt
ggtgggagtttaagacgagacgtgcagccattgtctccaatctccgttcacgagcgctac
agttctcctacagctgggagtgctaagagaaggctctttggagatgacagccccaaagaa
acgcagatggaaaaaatcttaatgaaaggaactaagctgacaattgctccagcatcaagc
attggtgctgaaaacatgtcagcatctcctgcccagacagtgctgaccatgacaaccact
acaggaccaggaaaagcaggacagaaggtcactatcccactgcatggtatttcaaatgac
atgggtggaatcaccttgatccccatttcgattaatttaggccagccatgtaaagtggat
gctcaggctccctgccaccctcctgggacccaaggagcagacgtggcgctgcccgtggcc
ggcaagccgaagagaacgggctccttggcactgttctacaggaaggtgtaccatctggca
agcgtgcgcctgcgggacctgtgcctgaagctggacgtgtccaacgacctgcgcaggaag
atatggacgtgttttgaattcaccttggttcattgtgctgatcttatgaaggacaggcat
ttggaccagctcctcctctgtgctttttatatcatggcaaaggtaaccaaagaggaaaga
acttttcaggacataatgaaaagttacaggaatcagccccaggcaaacagccatgtttat
aggagtgtcttgttgagaaatacttctgatgatgttccattggacaaaaatgcaaaccca
gatatggagatgacagaagactcatctgtgaaagctggcagctccttgggacggtccaca
gcagagaatttgagtgagtcagaaacagaggagagaggagatcttattaaattttacaac
gcagtctacgtaggaagagtaaagtcatttgcactcaagtacgatatcacaaaccaggat
catgtggtggaggcgccgccgctgtcgccgttccccagcctgcggccgcaggcggtgtcc
ccgcggcgaatctcgcagcagcactcggtgttcgtgtccccgcacaagaacaagaacggc
gcctgcctcacgccccgctctgccctgctctacaggttcaatggcagcccctccaagagt
ttgaaggacatcaacaatatgataaagcaaggtgaacataggagtaagaagcgagcaata
acaattgacagtgacactgaatctccctcaaagcgactctgccaggaaaatgatgatgtt
ctactgaaacgtctgcaggatgttgtcagtgagagagcaaatcactaa
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