Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456276
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Entry
135456276 CDS
T09958
Symbol
RTEL1
Name
(RefSeq) regulator of telomere elongation helicase 1 isoform X1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zle03032
]
135456276 (RTEL1)
Enzymes [BR:
zle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
135456276 (RTEL1)
DNA replication proteins [BR:
zle03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
135456276 (RTEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
SNF2-rel_dom
T4_Rnl1_C
C1_2
Motif
Other DBs
NCBI-GeneID:
135456276
NCBI-ProteinID:
XP_064586111
LinkDB
All DBs
Position
20:complement(6841068..6885739)
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AA seq
1303 aa
AA seq
DB search
MPRITLNGITVDFPFQPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWR
EHFKDTISARKIAQRMNGVELFPDRPVSSWGTAATDGDVPTYYTDIPKIIYASRTHSQLT
QVINELKNTVYRPKVCVLGSREQLCINPEVKRQESNHMQIYMCRMKVMARACHFYNNVEE
KSTEKEVIESIMDIEDLVKNGNKHRACPYYLSRSLKQQADIIFMPYNYLLDSKSRKSHNL
DLKGTVVILDEAHNVEKLCEESSSFDLTPYDLASAMDAINVVLEEQAKVVQQNEINAEFN
MELATSGLNMELEDIAKIKKILLQLESAIDAVELPANGNGVTKEGSYIFDLFAEAQITLQ
TKSSLLESLEQILQFLSGRTGIFVNTSGLHKVSDIIQTVFSVDPPEGVTTGFLPRQAISK
YYKVHIHVDNGNQKKKQRTDLWNSSSSKRQGKTLSYWCFSPGYSMHELVRQGVRTIILTS
GTLSPLSSFTMEMQIPFPVCLENPHVIDKHQLWVGIIPKGPDGAVLTSTYERRFSEDYLS
SLGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDFAKRIEEVKPMFVEPRNKGSFS
EVIDAYYDKVACPKSNGAAFLAVCRGKASEGLDFADINGRGVIITGLPFPPRMEPRVILK
MQFLDEMRKSGAGGQYLSGREWYSQQASRAVNQAIGRVIRHRQDYGAIFLCDHRFTTCDV
RGKLPSWVRPYVNVYDNFGHAVRSVSLFFRVAQETMPPPLPQCPPGHAGSLSESNAAPST
SSEQVLSLQKAKNLDDHVPSLKRKRKVNGDGAPSLCVEYEQEFVSPRRKCVGLLDALERS
EKSSEDAEEETDLQGEEKAHRLSTLSLQYEKRLTDEQKGGRKKIKLVSNTQERRAEPAEP
KKARATLYIATVKDTLSQQNYELFSKALQQYKKTDDFHAMLSQMSSLFVEDEKKHVLLRD
FYQFVRPQHKKQFDEACCNLTGLGCGYKPEHSLPREEREILAKRMEEKQSQQKSTFSKAS
CAQLNPGLHLNQGGSHLTTGLNSAGQNASAAPRKEAEKAPGSRREHHQALRTAYLSDVQR
ALDKSSYSQFYEALLAYKKTDNYDAMVSVIAALTTERPQDFHLLQRFYMFVRPHHKEQFR
ELCKGLTGMVCGDGEKQLQQLEQSEGKPQSVESCTKGISHKQDAAPSKSGAPEKIQSKIS
SFCFSQKSELELPKPEVSKETNIVRAPTDSGVVPIFPLEMEPECGRFHCSNCKSEDDVPF
KCPFCDFTCCKTCWKQFLKVVKKCPKCRSDVKRRRLTQVFFWS
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggatcactctgaatgggatcacagtggatttccccttccagccctacccatgc
caggaagcctacatggccaaggtactggaatgcctgcaaaagaaggtgaatggcattttg
gagagccccacaggcacagggaagaccctgtgcctgctgtgttccaccctggcctggagg
gagcacttcaaggacaccatctcagcccggaaaatcgcgcagcgcatgaatggggtggag
ctcttccctgacagacccgtgtcctcctggggcactgctgccacagatggagatgtccca
acttattacactgacattccaaaaataatttatgcctccaggactcactcccagcttaca
caggtcattaatgagctaaagaacacagtgtacaggccaaaggtttgtgtgctggggtcc
agggagcagctctgcattaaccctgaggtgaagcgacaggagagcaaccacatgcagatc
tacatgtgcagaatgaaagtgatggctcgtgcttgtcatttctataacaatgtcgaagaa
aagagtacagagaaagaagtgattgaatcaatcatggatattgaagacttggttaaaaat
ggaaacaagcacagagcttgtccttattatctctctcggagcctgaagcagcaagcagac
attatttttatgccttacaactatttactagactcaaagagcaggaaatcacacaacttg
gacctgaaggggactgtggtgatactcgatgaagctcacaatgtggagaagttgtgtgag
gagtcctcttcttttgacttgactccctacgatctggcttcagcaatggatgcaataaat
gttgtcctggaggaacaagccaaagtggttcaacagaatgaaatcaatgctgaattcaac
atggagttggccacttcaggactgaacatggaactggaagatatagcaaagatcaagaaa
attcttcttcagcttgaaagtgctattgatgcagtggagctgccagcaaatggtaatgga
gtcaccaaagagggaagctacatctttgatctgtttgcagaagcccaaataaccctgcag
accaaatcctccctcttggagtcactggagcagattttacagtttctttcaggccgtact
gggatatttgtcaatacatctggattgcataaggtctcagatattatccagacagtgttc
agcgtggatcccccagaaggagtcacaacagggttcctgccacgtcaggcaatatctaaa
tattacaaggtacatattcatgtggataatggtaatcagaaaaagaaacaaaggacagat
ctctggaactcatcatcttctaaaagacaagggaagactttaagctattggtgtttcagc
cctgggtacagcatgcacgagctggttcgccagggagtcaggacaatcatcctcaccagt
gggacactctcccccctctcatcatttaccatggaaatgcagatccctttccctgtttgc
ctggagaatcctcatgtaattgataaacaccagctctgggtggggatcattccaaaggga
cctgatggagctgtgcttacttccacctatgaaagaaggttttcagaggattatttatct
tctctggggaaaacaattggcaaccttgtgcgagttgtgccacatgggctcttggtgttc
ttcccatcctaccctgtcatggataagagcctggaatattggagagagcatgattttgcc
aaaagaatagaagaagtgaagccgatgtttgtggaacccaggaacaaaggaagcttttca
gaggttattgatgcctactatgataaagtcgcctgtcctaagtccaatggagctgctttt
ttggcagtgtgtcggggcaaggccagtgaaggcttggactttgcagacataaatggacga
ggagtcatcattactgggcttccatttccccctcgtatggagcccagagtcattttaaag
atgcagttcctggatgagatgagaaaaagtggtgcaggtggacagtatctgtctgggcgt
gagtggtacagtcagcaagcgtcccgggctgtcaaccaggccattggccgggtcatcagg
caccgccaggactatggggccatcttcctatgtgaccacaggttcacaacttgtgatgtc
aggggcaaactgccctcatgggtccgaccctacgtgaacgtttatgacaacttcgggcac
gcggtcagaagcgtctccctcttcttccgtgttgctcaagaaactatgcccccacccctg
cctcagtgccctcctggacatgctggttccctaagtgaaagcaatgcagcaccatctact
tcatctgagcaggtcctctccctgcaaaaagctaaaaatctggatgaccatgttccaagt
ttgaagaggaaaaggaaagtaaatggagatggagcacccagcctgtgtgtggaatatgag
caagagtttgtctcaccccgaagaaaatgtgttgggctcctggatgccttggagcgcagt
gagaagagcagtgaagatgcagaggaggaaactgatttgcagggagaggaaaaggcacat
cgtctgtccacgctttctcttcagtatgagaagagattaacagatgagcagaaaggagga
aggaagaaaataaagctagtcagcaatacacaggagcgcagagcggagccggcggagccc
aagaaggcgcgggccacgctttacatcgccacagtgaaggacaccctgagccagcagaac
tatgagctcttctccaaggctctgcagcagtacaagaagacagatgacttccatgccatg
ctgtcccagatgagctccctctttgtagaggatgaaaagaagcacgtcttgctgcgagat
ttttaccagtttgttcgaccccagcataaaaagcagtttgatgaagcatgctgcaatctg
actggattgggctgtggctacaaacctgagcacagcctcccacgggaggagagggagatc
ctggccaagagaatggaagaaaaacagagccagcagaaaagtacattctccaaggcctca
tgtgctcaactgaaccctgggctccacctgaaccaaggaggatcccacttgacaacagga
ctgaatagtgcagggcagaatgccagtgcagctccaaggaaagaggctgaaaaggctcca
ggctccaggagagagcatcaccaggccctcaggactgcctatctcagtgatgtgcagagg
gctttggacaaaagcagctacagccagttctatgaggctctgctggcttacaagaagaca
gataactacgatgccatggtgtcggtgatagcagccctcaccaccgagaggccacaggac
tttcatctcctacaaaggttttacatgttcgtgcgtcctcaccacaaggagcagttcaga
gagctgtgcaagggtttgactggaatggtctgtggtgatggagagaagcaattgcagcag
ttggagcaaagtgaagggaaaccccagagcgtggagagctgcacaaaaggaatcagccac
aaacaagatgcagccccttctaagagtggggcaccagaaaaaattcagagtaagatttcc
tccttctgcttcagccagaaaagtgaacttgagttgccaaagcctgaagtgtccaaagaa
accaatattgtgagagcacccacagactctggagttgtgcccatctttcccctagagatg
gagccagagtgtggaagattccactgctctaactgcaaatccgaggatgatgtgcctttt
aaatgcccattttgtgacttcacttgctgcaaaacgtgctggaagcagttcttaaaggtg
gtgaagaagtgccccaagtgccgcagtgatgtgaagaggcggcgattgacccaagtgttc
ttctggtcctga
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