Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456279
Help
Entry
135456279 CDS
T09958
Symbol
STX16
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
135456279 (STX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135456279 (STX16)
Membrane trafficking [BR:
zle04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
135456279 (STX16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
ATG17_like
Syntaxin
MCPsignal
Syntaxin_2
DUF5345
DUF2116
DUF3140
DUF4191
Orf78
Prominin
T3SS_needle_E
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
135456279
NCBI-ProteinID:
XP_064586120
LinkDB
All DBs
Position
20:3293825..3304753
Genome browser
AA seq
322 aa
AA seq
DB search
MATRRLTDAFLLLRNNAVQSRQLLAEQVSSFGSSSPLNSRSMAAALADDRMALVSGISLD
PEAAIGVTKRLPPKWVDGADEIQYDIARVKQKMKELASLHDKHLNRPTLDDSSEEERAIE
ITTQEITQLFHRCQRAVQVLQSRSRTCTEQEARVLRNVVSSLAQALQDLSTNFRHAQSDY
LKRMKNREERSKHFFDTSVPLMDDGEDDTLYDRGFTDDQLALVEQNTLMVEEREREIRQI
VQSISDLNEIFRDLGAMIVEQGTVLDRIDYNIEQSCMKTEEGLKQLHKAEQYQKKNRKML
VILILFVIVIVLIVVLIGVKSH
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggccacccggcgtctcacggacgcgttcttgttgttgcggaacaacgcggtgcagagc
cggcagctgctggccgagcaagtgagtagtttcggctcctccagccctctgaattcacgt
agcatggctgctgcgctggctgatgaccgcatggccctggtgtcagggatcagcctggac
cccgaggccgccatcggcgtcaccaagcgcctcccgcccaagtgggtggatggggcagac
gagattcagtatgatattgccagggttaaacagaaaatgaaagaattagccagtcttcat
gataaacatctaaacagacccaccctggatgacagcagtgaagaggaacgggcaatagaa
atcacaacccaggagatcacacagttattccacaggtgtcagagggcagtgcaggtgctg
cagagcaggtcacgcacctgcacggagcaagaagcgcgagttctcaggaatgtggtgtct
tccttggcacaggccctgcaggacctctccaccaactttaggcatgcacagtctgactat
ctcaaacgtatgaagaatagagaagaaaggtccaaacacttctttgacacctcagtccca
ctgatggatgatggggaggatgatacactttatgatagaggttttacagatgaccagctg
gcattggtggagcaaaacacgctgatggtggaagagagggagcgagaaatccgtcagatt
gtgcagtcaatctctgatctcaacgagatatttagggacctgggagcaatgatagtagaa
cagggaacagttctagatagaattgactataatattgaacagtcatgtatgaaaactgaa
gagggtctaaaacaactgcataaggcagagcaatatcaaaagaagaatcggaagatgctc
gttattttaattttgtttgttatagtaattgtccttattgttgttcttattggtgtaaag
tcacactag
DBGET
integrated database retrieval system
