Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456319
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Entry
135456319 CDS
T09958
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135456319 (NELFCD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135456319 (NELFCD)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
135456319 (NELFCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
135456319
NCBI-ProteinID:
XP_064586171
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Position
20:3475903..3485086
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AA seq
583 aa
AA seq
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MEDADYFEGSAAEWGSEADGGAQDDEDGEGEDDAEVQQECLKKFSTPDYIMEPSIFNTLK
RYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPMQVQETVENHLKSLLIKHF
DPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGE
ITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFAQSMMSI
LAQEEQGGSAVRRIAQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAMLSKGALNP
ADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVV
EMWKKNKRVSINKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCIRFPVVAMGV
LKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVM
EQLELKKTLLDRMVHSLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLDVIAPPYTS
DFVQLFLPILENESIAGTIKTEGEHDPVTEFIAHCKSNFIMMN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccgattacttcgagggcagcgcggccgagtggggcagcgaggcggacggg
ggcgcgcaagatgatgaggatggggagggagaagatgatgccgaagttcagcaggagtgc
ctgaagaaattttcaacgcctgattatataatggaaccgtctatatttaacacgttaaag
agatatttccaagcaggaggatctccagagaatgttattcagctcctctctgaaaactat
actgcagtggcacagactgtcaatttgctggcagagtggctcattcagacaggtgttgag
ccaatgcaggtgcaggagactgtggagaaccacttgaagagtttgctgatcaagcacttc
gaccctcggaaggcagattccatcttcaccgaggagggagagactccagcctggcttgag
caaatgatagcacataccacgtggagagaccttttttacaaattggcagaagcccatcct
gattgtttaatgcttaattttactgtgaagcttatatctgatgctgggtatcaaggagaa
ataacgagtgtttcaacagcatgtcagcaactagaagtattttccagagtcctgcgtaca
tctctggcaacaattttagatggaggagaagaaaaccttgagaaaaacctccctgagttt
gctaagatggtgtgccatggggagcacacgtacctgtttgcccagtccatgatgtccatc
ctggcgcaggaggagcagggcggctccgccgtccggcgcatcgcgcaggaggttcagcgc
tacgcccacgagaaaggccacgatgccagccagatcaccttagcactgggtactgcagcc
tcctaccccagagcttgccaggctctgggggcaatgctgtccaaaggagctctgaatcca
gcagatatcactgtcctcttcaaaatgtttacaagcatggacccacctccagtagaactg
attcgagtgcctgcatttctggacctcttcatgcagtccttgtttaaaccaggtgctaag
atcaaccaggaccacaaacataaatatatccacatactggcatatgcagctagtgttgta
gagatgtggaaaaagaacaagagagtcagcatcaacaaggatgaactcaagtcaacctca
aaagccattgagactgttcacaatctgtgctgcaatgagaacaaaggggcatccgagctg
gttgcagagctgagcactctctatcagtgcatcaggttcccagtggtggccatgggggtg
ttgaagtgggtggactggacagtgtcagagccacggtacttccagctgcagactgatcac
accccagttcacctggccctgctggatgagatcagtacatgccatcagctgcttcatccc
caagttctgcaacttcttgtcaagctctttgaaacagagcattctcagctggatgtgatg
gagcagctggagctgaagaagactctcctggacaggatggttcactcgctgagccggggc
tacgtcctgcccgtcgtcagctacatccgcaagtgcctggagaagctggacactgacatc
tccctcatcagatactttgtgacagaggtgctcgatgtgattgctcctccatatacctca
gactttgtacagctttttcttccaatcttggagaatgaaagcattgcaggcactataaaa
acagaaggtgaacatgatcctgtcacagagttcatagctcattgcaaatctaactttatt
atgatgaactaa
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