Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456356
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Entry
135456356 CDS
T09958
Symbol
TAF4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135456356 (TAF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135456356 (TAF4)
03036 Chromosome and associated proteins [BR:
zle03036
]
135456356 (TAF4)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135456356 (TAF4)
Coactivators
SAGA/TFTC/STAGA complex
135456356 (TAF4)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
135456356 (TAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
135456356
NCBI-ProteinID:
XP_064586208
LinkDB
All DBs
Position
20:complement(4560287..4597136)
Genome browser
AA seq
1103 aa
AA seq
DB search
MAAGSDLLDEVFLNTEVDEKVVSDLVGSLESQLAASGHHHQHHKAQEPLRAAGGLLGNHV
VSSSSSSSSPSPSPGGVVVGGNANAQTESSSGSKMGLSAPEITKAGAGGVQGGVINHNTR
SQTSALDGATTTSTSTTTAAAGGSEVTAAPGTLSQGKSVVISTMATALSTRNGKIGTTTV
QTLNGSNVVMNSHHTGSAAFSGTPVTANPAPAPAVAPLVNNGPGSVGKGNAVNAVLPSAS
NTVIQTSFLNTAVSSASSSSPTVISSQPPASVGAGAPTVTLVRPPIHTAGPTVAAAAAAT
QNGSNTVINSTISVGSFPAVATATVGSGVSLQTSLVNSQSGSSVPAAPATQVIKSESPKT
IVQAVSQQQTLATAGQPSTTGGNMIIGQTMQAGLSNVAPNPGGIPPAAPGTPTGMAKGTA
NTVAQSLPRTPTPTTSGIRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQL
LMIPQQALAQMQAQAHAQSQPQNTLTPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTI
IKQVSQAQTTVQPTTTLQRPPVVQPQIVLGGTAQTTTLGTATAVQTGTPQRTVQGTTATS
TAATETMENVKKCKNFLSTLIKLASSGKQSTETAANVKELVQSLLDGKIEPEDFTSRLYR
ELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPTTQATIATIPSVTSVLLSSS
VQRTAGKATATVTSTLQQPVISLTQPTQVGVSKQGQSTPLVIQQSQKAGALIRPPQVTLT
QTPMVALRQPHSRIMLTTPQIQLNQLQTVPVVKPAVLPGNKAIATVSTQVAAAQKNKLKE
PGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTRSCKDETFLFPAPLQRRI
LEIGKKHGITEIHPDVVSYVSHATQQRLQNLVEKLSETAQQRNISYKDDERYEQASDVRA
QLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLKQKAKEMQQQELAQMRQR
DANLTALAAIGPRKKRKVDSPGSGSGTEGSGSSAAVPGSSGVGTTRQFTRQRITRVNLRD
LIFCLENERETSHSLLLYKAFLK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggatgaggttttcctgaacacggaggtggatgagaag
gtggtgagcgacctggtgggctccctggagtcccagctggcggcctccggccaccaccac
cagcaccacaaggcgcaggagcccctaagggccgctggggggctgctagggaaccatgtt
gtgagcagcagcagtagcagcagcagccctagccccagccctggaggagtagtagtagga
ggcaatgctaatgcccaaacagagagcagcagcggcagcaagatgggactgagtgcccca
gagatcacaaaagcaggggcaggaggagtgcaggggggtgttattaatcataacaccagg
tcccagacttcagctctggatggagccaccacaacgagcaccagcaccaccactgcagca
gcaggaggatctgaagtcactgctgctccagggaccctcagtcagggcaaatcggtggtt
atcagcaccatggcaactgccttgtccaccaggaatggcaagatcgggaccacgacggtg
cagactttgaatgggagtaacgtggtgatgaactctcaccacacaggaagtgctgctttc
tctgggactcctgtgaccgccaaccccgctcctgcacctgctgtcgcccctctcgttaac
aatggacccggatccgtggggaaaggaaacgctgtcaatgctgttttaccctcagcttct
aacactgtcatccagacttctttccttaacactgctgtgtcctctgcgtcctcctcctcg
cccacagtgatctcctcgcagccgcccgccagcgtcggcgccggggcgcccacggtgacg
ctggtgaggccccccatccacactgcaggacccacggtggctgcagctgctgcagccact
cagaacgggagcaatactgtgatcaattcaaccatcagtgtggggagttttcctgctgtt
gccacagccactgtgggatctggagtttccctccagacgtcgcttgtgaacagccagtct
ggttccagtgtgccagcagctcctgccacgcaggtcatcaaatctgagtctcctaaaact
atagtgcaggcagtgtcccaacagcagacgctggctactgctggccagcccagtactaca
gggggtaacatgattattgggcaaactatgcaagctgggctctccaatgttgctcccaat
cctggtgggatacctcctgcagctcctggcacccccacaggaatggctaaaggcactgcc
aacacagtggcacaaagtctgccaaggactccaacaccaactacgagtggaatcagagca
actttgactcctacagttttagcacctcgtttgcctcagccacctcagaatccgactaac
attcagaattttcagttaccaccaggcatggtgctggtgcgcagcgagaacgggcagctg
ctgatgatcccccagcaggccctggctcagatgcaggcccaggcacacgcccagtcccag
cctcagaacactctgactcctcgtcctgctacacccaccagtgcacccccagtgcagata
tccacagtgcaggctccaggaacacccattattgcacgacaggtgacaccaactactatc
atcaagcaagtgtctcaggctcaaaccacagtgcaacccacgaccacgctgcagcggccc
ccggttgtgcagcctcagatcgttctgggtggtactgcacaaacaaccacgttggggaca
gcaacagctgtacaaactggaactcctcagagaacagtgcaagggacaacagccacctcc
actgctgccacagaaactatggaaaatgtgaagaaatgcaaaaactttctgtccacatta
ataaaactggcatcatctggaaaacagtccacagagactgcggctaatgtgaaggaatta
gtgcagagtctgctggatggaaaaattgaaccagaagattttaccagtaggctctacaga
gaacttaattcttcacctcaaccttaccttgtgcctttcctgaagaggagtttacctgcc
ttgagacagttaacaccagactctgcagctttcatccagcagagccagcagcagcagccc
acgacgcaggcgacgatagccacgatcccgtcggtgacgtccgtgctgctgagctcctcg
gtgcagcgcacggcgggcaaggccactgccactgtcaccagtaccctccagcaacctgtc
atcagcctcactcagcccacacaagttggtgtcagtaaacaagggcagtccacgccactg
gtaattcaacagtctcaaaaagcaggggcattgataaggcctccacaagtaacgttgaca
cagacacccatggtggcattgcggcaaccacacagtcgtatcatgctcaccactcctcaa
atccagctgaatcaactgcagacagtccctgtggtaaagccagcagtattacctggaaac
aaagctattgccactgtttcgacacaagtagctgctgctcagaagaataaactgaaagaa
cctgggggaggctcttttagggatgatgatgacattaatgatgttgcatccatggctgga
gtcaacctgtcagaagaaagtgctcggatattggcaacaaactctgagctcgtgggcaca
ttaacacggtcctgtaaagatgaaaccttccttttcccagcacctttacaaagaaggata
ttagaaataggtaaaaaacatggaataacagaaatccatcctgatgtagttagctacgta
tcacatgctacacaacaaagactacaaaacctcgtggaaaaactatcagagactgctcaa
caaaggaatatttcctacaaggatgatgaaagatatgaacaagcaagtgacgttcgggca
cagctcaagttctttgaacaacttgatcaaatagaaaagcagcgtaaagatgaacaagaa
agggaaattttaatgcgcgcagcaaagtctcgatctcgacaagaagatccagaacagctt
aggttgaaacagaaggccaaggagatgcagcagcaagagctagcacagatgagacagagg
gatgccaacctgactgcgttagctgccatcgggcccaggaagaaaaggaaagtggattcc
ccaggatctggatcagggacagagggatctggttcgagtgcagcagtcccaggcagctct
ggagtcggaacaaccagacagtttacgcgacaaaggataacgcgggtgaacctcagggac
ctcatattttgtttagaaaatgagcgagagacaagccattcactattgctatacaaagca
ttccttaagtaa
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integrated database retrieval system
