Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456461
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Entry
135456461 CDS
T09958
Symbol
CTCFL
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional repressor CTCFL
KO
K23195
transcriptional repressor CTCF
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135456461 (CTCFL)
03036 Chromosome and associated proteins [BR:
zle03036
]
135456461 (CTCFL)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
135456461 (CTCFL)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135456461 (CTCFL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_7th_ZNF462
zf-met
Motif
Other DBs
NCBI-GeneID:
135456461
NCBI-ProteinID:
XP_064586381
LinkDB
All DBs
Position
20:complement(2772537..2784053)
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AA seq
353 aa
AA seq
DB search
MDKQPLQSSKINRENDAIASENNIQQLRPSEEGEGKEVFSTVGETKSQSCKGGDDLSDSF
NESKEQEYPTASEQTVEKIKVSTVFFCTFTSVKLWSLGRHLKTHSDEKHHACHLCPKXFR
TAALLHSHXNTHTGNKPHKCSEFDTAFVTRGELARHRRYKHTLEKPFKCTICEYSSVEAS
KMRRCVRSHTGERPFPCHLCSHASKDACKLERHVLTHTDKKCYECYVCQARFTQRGTMKI
HVLQKHGENGPKHQCPHCSAFLSRKSDLGLQSNICKHAENRGLVRAKTATPRKGRKGKNK
IHENPKRAKAEVALKLFPDDSTVKNEHCASEIVPVSDGTETATPREHRAEAAQ
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggataaacagcctctgcagtcatccaaaattaacagagaaaatgatgccattgcctct
gaaaataacatccagcaactgagaccatctgaagagggggaaggaaaggaagttttttcc
actgttggggaaacaaagagtcagagctgcaaagggggtgatgatttgtcagactctttc
aatgaaagtaaagagcaggaatatccaactgcatcagaacaaacagttgagaaaataaaa
gtttcaactgtttttttctgcacgttcacctcagtgaagttgtggagtcttgggcgtcat
ctgaaaacccattcggatgagaaacatcacgcgtgtcacctctgccccaagngcttccgt
acagcagccctgctgcacagccatngtaacacacacacagggaacaaaccccataaatgc
agtgagtttgacacagcctttgtgacccgaggggaacttgcacgacacaggaggtacaag
cacactttggagaagcctttcaagtgcacaatatgtgaatactccagtgtggaagccagc
aagatgaggcgctgcgttcgctcgcacacgggagagcggcccttcccctgccacctgtgc
agccatgccagcaaagatgcctgcaagctggagaggcacgtgttaactcacacagataaa
aaatgctatgagtgttatgtttgccaggccagattcactcagagaggcaccatgaaaatc
catgtgttacagaaacatggagaaaatgggccaaaacaccaatgtccccattgtagtgct
ttcctttctcgaaaaagtgatttgggtttacagagtaatatatgtaagcatgctgaaaat
cgtggattggtgagggcaaaaactgctacacccagaaaaggaaggaaaggcaaaaataaa
atccatgagaacccgaagcgtgctaaggcagaagttgccctgaaattattcccagatgac
tctactgtgaaaaatgaacattgtgccagtgagattgttcctgtttcagatgggacagaa
acagcaactccaagggaacacagagcagaagcagctcagtaa
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