Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456483
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Entry
135456483 CDS
T09958
Name
(RefSeq) putative iroquois-class homeodomain protein irx-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135456483
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
135456483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
135456483
NCBI-ProteinID:
XP_064586413
LinkDB
All DBs
Position
20:complement(7921252..7922792)
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AA seq
230 aa
AA seq
DB search
MAVLGLGMAAPRGERSPAQELGGCGGPWGTLRGPPQALLPCPYPYSCPCPVLAGYSLLPP
PLSLVTPLVSAPFEVPLGLPTEPGRAKAAATRESTGALKAWLARHPRNPYPSKGEKVMLA
VVSRMSLTQVSTWFANARRRLKKEKKASWATQSASDGEDSEGEGVPSSAAPIPSSSPVQD
GCGGSSEVMTGPGQDKQPQKPKIWSVAEMLESSPSNSECPPVVPVVLEQV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgctggggcttggtatggcagcacctcggggcgagaggagcccagcacaagag
ctggggggctgcggggggccttgggggaccctgcgggggccaccccaagccctgctgccc
tgcccctacccctactcctgcccctgtcccgttttggccgggtacagcctcctgccaccc
cctctcagcctcgtgacgcccctggtctcagcaccctttgaggtgcccctggggctgccc
acagagccggggcgggcgaaggcggcggcgacgcgggagagcaccggggccctgaaggct
tggctggcacggcaccccaggaacccctaccccagcaagggggagaaggtgatgctggct
gtggtcagccggatgagcctcacccaggtctccacctggttcgccaatgcccgccggcgc
ctcaagaaggagaaaaaggcgagctgggccacacagagcgcctcagatggcgaggacagc
gagggagagggggtcccatcaagtgctgcccccattcccagttccagccctgtgcaggat
gggtgtgggggcagctccgaggtgatgacaggccctgggcaggacaagcagccccagaaa
cccaagatctggagtgtggcagagatgctggaatcttcacccagcaacagcgagtgtccc
ccggtggtgccagtggtgctggagcaggtatag
DBGET
integrated database retrieval system
