Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456504
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Entry
135456504 CDS
T09958
Symbol
CROCC
Name
(RefSeq) rootletin isoform X1
KO
K16469
rootletin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zle03037
]
135456504 (CROCC)
Cilium and associated proteins [BR:
zle03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
135456504 (CROCC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
Motif
Other DBs
NCBI-GeneID:
135456504
NCBI-ProteinID:
XP_064586440
LinkDB
All DBs
Position
21:6063510..6098417
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AA seq
1713 aa
AA seq
DB search
MASLLSLQEENRILQQELSRVEDLLAQSRAERDELAIKYNALSERLEQSLRLEPEEAAES
RSLAQHNIELRRLLEEEQAAYKRKLQAYQEGQQRQAQLVQKLQAKVLQYKKKCGEVEQQL
LEKATELEQERLTIQLDASGSQPEEESSNELENALIRLEEEQQRSSSLVQVNSMLREQLE
QANVANAALSEDIRKLTADWARARDELEQREAEWRREEESFNTYFSNEHSRLLTLWRQLV
AFRRHFGDMKATTERDLSELGHEVSRTGRAAHAACLHLAANLRLAESQAGAARERQELRL
EQLQEQLEARARDAELEKNTLAARLAELTAALERRRSEDEEKERAVEALTLQLRELEAAR
AREPTPEQVQALRSELELLRRTLHEITQAVLADDPESPVPAVSLPCPPVSPSCPAVSPLR
SLSASAAAAAVHAALSRRQLQLQEARSQAEAGREAAGSLRRELGMLEQRLEQLGAEAGSC
RRAQEEAQREGLQLRAQAEGLRRELCRAEAALAEEQQRAGALQQEREQLRRRSESLQDCR
DQAARDAQAAHEQLQHSQQQVQELEAQRARAQRELLEAREELSRALLEAELARGEQEALE
EALGKAQGSCGELAEARRAAEAEESRLRDALAKTSELAAGLARDKAELGRRLERLEQERE
RGRLRSRELCRELALLRARLESGPRPGSEWRDLERTLRGPRDDGRGLREELRELRGLHER
LRHSLGQAVQEQSAAGEALARARAEQERLRAEQERLGRTQAALAQDGAGLAVQIAAAQRQ
ERHRDREAAGLRSEKEGLESAVFQLQQELAQLQARNQQLEAQGQTLAQAKEALEAELGVA
RRERAQELRERRQAVAVAEAAAVAAALQSARDAHREQLEQLQREKEELEAERGRLVQEHE
ELVADLAAARQQRQSEKQQALALQEEERVALAGTLAGLQQSLDEATAELEQRRRELTGHQ
EKEQALAAELRSLRLRAEEAALSHEREARALRDQAAAAAKQRDSALREAEEARVQLQAGA
EARAAARRELLEAQREARDSREGRDTERRRAQEARRALGDAAREKEALQRSNEELRAALR
RAEGERISLKRSGEDKEQRVALLEAARAAAEREVSELRAALRGLERARLESRRELQELRR
QVKELDSENSRRGRELGELQARVALEEQREQRSRREASGLRQKVAESEAGTEAARKELQQ
LQQRLAAAEQEFRRREQELSRSLEEARGNEKKLLADARNLQLKVEAARAEVAELGLRLSA
AQGRAQGLEAELARGEEQRRSTESRLGGLQATLLRTVAAARAKGGVPEGPGSPGSVPDAD
ADPEALRAALREFLRELQDAQREREELRGQVSSLGRRLAEAEAERDSAGARAQRLQKLLD
ESEQGRRELSGARASLLLQDETLRRSQRECRGLRERLSALESGMRAAERERRAGQEKLGE
LEEARQRLELCESRSARLELQRRALEAELGRARRALAERDAEAREARERAEQLRTQLAQA
ESRSGPPFPVPPGSGSKGEAPAGSALHERLLQLQNALAAGETDRRLLQEGLEEARRALAE
ARREKGMLREQLREQRELGMLREPGMPREPGMPRDLGVLREPGLSREPGMPPEPSQDRQQ
EERDPPGRAGSVQLPAGPDPPMGSAERELEEARKRIQVLRAQVSALELRARPLPEDPAEL
QRELERLRLGRGGLEEQIALLKEQELQRHPTGT
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgctgctgtccctgcaggaggagaacaggatcctgcagcaggagctgtcccgt
gttgaggacctgctggcccagagccgggctgagcgtgatgagctggccatcaagtacaac
gccctcagcgagcggctggagcagagcctgcggctggagcccgaggaagcggccgagagc
cggagcctggcccagcacaacatcgagctgcgccggctgctggaggaggagcaggctgcc
tacaagaggaagctccaggcctaccaggagggccagcagcgccaggcccagctggtgcag
aagctccaagccaaggtgttgcagtacaagaagaaatgcggggaggtggagcagcagctg
ctggagaaggcgacggagctggagcaggagaggctgacgatccagctggatgccagcggc
tcccagcccgaggaggagagcagcaacgagctggagaacgccctgatccgcctggaggag
gagcagcagaggagcagcagcctggtgcaggtgaactcgatgctgcgggagcagctggaa
caggccaacgtggccaacgcggcgctgagcgaggacatcaggaagctcacggcggactgg
gcacgggccagggacgagctggagcagcgggaggcggagtggaggcgggaggaggagtcc
ttcaacacctacttcagcaacgagcacagccggctcctcaccctgtggcggcagctggtg
gccttcaggcgccacttcggggacatgaaagccaccaccgagagggacctgtcggagctg
ggccacgaggtgtcgcggacgggccgtgctgcccacgccgcctgcctgcacctggctgcc
aacctgcggctggccgagagccaggcgggcgccgcccgcgagcggcaggagctgcgcctg
gagcagctgcaggaacagctggaggcgcgggcacgggatgcggaactggagaaaaacacc
ctggcagccaggctggcggagctgacagcggccctggagcggcgccggagcgaggatgag
gagaaggagcgggcggtggaagcgctgacgctgcagctgcgggagctggaggccgcgcgt
gcccgggagccgacgccggagcaggtgcaggctctgcgctccgagctggagctgctgcgc
cggacgctgcacgagatcacccaggcggtgctggcagatgaccccgagtccccggtgccc
gctgtgtccctcccgtgtccccccgtgtccccttcgtgtcctgccgtgtcccctctccgc
agcctctctgccagcgccgccgctgccgccgtccatgcggctctgagccggcgccagctc
cagctgcaggaggcccggagccaggcggaggcgggccgggaggcggccgggagcctgcgg
cgggagctggggatgctggagcagcggctggagcagctgggagccgaggccgggagctgc
cggcgggcgcaggaggaggcgcagcgggaggggcttcagctgcgggcccaggccgagggg
ctgcgcagggagctgtgccgcgcggaggcggcgctggcggaggagcagcagcgtgcgggg
gccctgcagcaggagcgggagcagctgcggcgccgcagcgagagcctgcaggactgccgg
gaccaggctgcccgcgacgcccaggctgcccacgagcagctgcagcacagccagcagcag
gtgcaggagctggaggcacagcgggcgcgggcgcagcgggagctgctggaggcgcgggag
gagctgagccgggcgctgctggaggcggagctggcccggggcgagcaggaggcgctggaa
gaggccctgggcaaggctcagggcagctgcggggagctggcggaggcccggcgggcggcg
gaggccgaggagtcgcggctgcgggacgcgctggccaagaccagcgagctggcggccggg
ctggcccgggacaaggcggagctgggccggcggctggagcggctggagcaggagcgggag
cggggccggctgcgcagccgggagctgtgccgggagctggcgctgctgcgggcacggctg
gagagcggcccccggcccggcagtgagtggcgcgacctggagaggacactgcggggcccc
cgggacgacgggcgggggctgcgggaggagctgcgggagctgcgcgggctccacgagcgg
ctgcgccacagcctgggccaggcggtgcaggagcagagcgcggcgggcgaggcgctggcg
cgggcgcgggcggagcaggagcggctccgggccgagcaggagcggctgggccggacgcag
gcggcgctggcccaggacggggccgggctggccgtgcagatcgcggctgcccagcgccag
gagcggcaccgagaccgcgaggccgccgggctcaggtcggagaaggaggggctggagagt
gccgtgttccaactgcagcaggagctggcccagctccaggcccgcaatcagcagctggag
gcccaaggccagaccctggcccaggccaaggaggcgctggaggcggagctgggcgtggcg
cggcgggagcgggcgcaggagctgcgggagcggcgccaggcggtggcggtggccgaggcg
gccgcggtggcagcggcgctgcagagcgcccgcgatgcccaccgggagcagctggagcag
ctgcagcgggagaaggaggagctggaggccgagcggggccggctggtgcaggagcacgag
gagctggtggccgatctggcggcggcgcggcagcagcgccagagcgagaagcagcaggct
ctggcgctgcaggaggaggagcgggtggccctggcagggacattggcagggctccagcag
agcctggatgaggccacggccgagctggagcagcggcggcgagagctcacgggccaccag
gagaaggagcaggccttggcggcggagctgcgctcgctgcggttgcgggcggaggaggcg
gcgctgagccacgagcgggaggcgagggcgctccgggaccaggcggcagcggcggccaag
cagcgggacagcgccctgcgggaggcggaggaggcgcgggtgcagctgcaggccggggcc
gaggcgcgggcggcggcgcggcgggagctgctggaggcgcagcgagaggcccgggacagc
cgcgagggccgcgacaccgagcggcggcgggcgcaggaggcgcggcgggcgctgggcgat
gccgcccgcgagaaggaggcgctgcagcgctccaacgaggagctgcgggcggccctgcgg
cgcgccgagggagagcgcatcagcctgaagcgctccggggaggacaaggagcagcgtgtg
gcgctgctggaggcggcgcgggcggcggccgagcgggaggtgtcggagctgcgggcggcg
ctgcgggggctggagcgcgcccgcctggagagccggcgggagctgcaggagctgcgccgc
caggtgaaggagctggacagcgagaacagccggcggggccgggagctgggggagctgcag
gcgcgggtggcgctggaggagcagcgggagcagcgcagccgccgcgaggcctcggggctc
cggcagaaggtggctgagagcgaggccggcaccgaggctgccaggaaggagctgcagcag
ctgcagcagcgcctggcggcggcggagcaggagttccggcggcgggagcaggagctgtcg
cgcagcctggaggaggcgcggggcaatgagaagaagctgctggcggacgctcggaacctg
cagctcaaggtggaggcggcgcgggccgaggtggcggagctggggctgcggctgagcgcg
gcgcagggccgggcgcaggggctggaggcggagctggcccgcggcgaggagcagcgcagg
agcaccgagtcccgcctgggagggctccaggccaccctgctccgcaccgtggccgcggcc
agggccaagggcggggtcccggagggtccgggcagccccggctccgtcccggatgccgat
gccgatcccgaggcgctgcgggcggcgctgcgggaattcctgcgggagctgcaggacgcg
cagcgcgagcgggaggagctccggggccaggtgagcagccttggacggcgcctggcggag
gcggaggcggagcgggacagcgccggggcccgggcacagcggctgcagaaactgctggat
gagagcgagcaagggcggcgggagctgagcggggcccgcgcgtcgctgctgctgcaggac
gagaccctgcggcgctcgcagcgggaatgccgcgggctgcgggagcgcctgagcgccctg
gagagcgggatgcgggcggccgagagggagcggcgggcgggacaggagaagctgggcgag
ctggaggaggcccggcagcggctggagctgtgcgagagccgcagtgctcggctggagctg
cagcggagggcgctggaggcggagctgggccgggcccggcgcgctctggccgagcgggac
gcggaggcgcgggaggcgcgggagcgagcggagcagctccgcacgcagctggctcaggcc
gagtcccgctcggggccgccgttcccggtgccgccggggagcggctccaagggggaggct
ccggccggctccgcgctccacgagcggctcctgcagctccagaacgcgctggccgcgggc
gagacggaccggaggctgctccaggaggggctggaggaggcgcggcgggcgctggcggag
gcgcggcgggagaagggaatgctgcgggagcagctgcgggagcagcgggagctggggatg
ctgcgggagccgggaatgccgcgggagccgggaatgccacgggatctgggagtgctgcgg
gagccgggattgtcccgggagccgggaatgccaccggagccctcccaggaccggcagcag
gaggagcgggaccctcccggccgggctggatccgtgcagctcccggcagggccggatccc
cccatgggctcggccgagcgggagctggaggaggctcggaaacgcatccaggtgctgcgg
gctcaggtgtcggcgctggagctccgggcccggccgctccccgaggatcccgcggagctg
cagcgggagctggagcggctccggctcggccgcggcggcctggaggagcagatcgcgctg
ctcaaggagcaggagctgcagcgacatcccactggaacttag
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integrated database retrieval system
