Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456541
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Entry
135456541 CDS
T09958
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
zle03036
]
135456541 (CHD5)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
135456541 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
135456541
NCBI-ProteinID:
XP_064586514
LinkDB
All DBs
Position
21:complement(3595983..3620570)
Genome browser
AA seq
1956 aa
AA seq
DB search
MRGPPAARDLLDDADNEEDVSEEDDGVLEGLDEFFAEDQVVVQKKKKSKKLKDGKAAKIK
RRKKEGSNDEMSENEEEMEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKEEEEDDND
DGSLKEPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTTSPGLPASPQPSALPTVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKTAGLKFRFGGISSKRKKGSSSEEEEREESDFDSA
SINSSSVRSECSAGLGKRGKKRKKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEEDDHMEFCRVCKD
GGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWREPPAPP
PPAAAPQQPALPPPKALEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKN
DMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIHRILNHSFDKKG
DIHYLIKWKDLPYDQCTWEIDDIDIPYYENLKLLYWNHRELMLGEDTRPLKKLNKKGKKL
KEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADE
MGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKES
RSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAVLGSIEWACLVV
DEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLE
EFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTR
NFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNSLVKSSGKL
MLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRF
NAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIY
RFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVE
GMVSQGQRIAMPDAVTPFSDTLSTKGGAAAPGMKKKHGSTPPGDNKDVDDSSVIHYDDAA
ISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWE
KLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQSEYSIGSEDEDE
DFEERPEGQSGRRQSRRQLKTDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGM
PPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVL
TRIGVMSLVRKKVQEFEHVNGKYSTPDLLLEGPESKRSSEVVSSDPNTPVPASPAHTHAG
PGALADKTEAQLGFHEEKELVEQKSRKVSDSQVPASGEVESEEPPESCDSKERPRKEKQE
DCEKAEPSSEPLVKGLFPPADEGIQEQEKPLEKAELSSSPGKGEDKEVKPEDGKEEEKEP
SDAQQNGDKEEEEEGKKDDRNINFRFMFNIADGGFTELHTLWQNEERAAMSSGKIYDIWH
RRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKNKFLARRFKLLE
QALVIEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVL
HKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATRGGDPAAQGSFG
SAPIFNNSFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5871 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgccggccgcccgcgacctgctggacgacgcggacaacgaggaggacgtg
tcggaagaagatgatggggtgctggaaggattggatgagttttttgcagaagaccaagtt
gtggtgcagaaaaagaagaaatccaagaagctgaaagatggcaaggctgccaaaatcaag
aggaggaagaaggaggggagcaatgatgaaatgtcagaaaatgaagaggagatggaggag
aaatcagaaagcgaagggagcgactattctcccaacaaaaagaagaagaaaaaactgaaa
gacaagaaggagaaaaagccaaaacggaagaagaaggaggaagaggaggatgacaatgat
gatggaagtttaaaggagcccaagagctcagcccagcttatggaggaatggggtctcgat
gacgtagattacgttttctcagaagaggattaccatactctgaccaattacaaggctttc
agccagttcctcaggcctctgattgccaagaagaaccccaagatccccatgtccaagatg
atgacggtgctgggtgccaagtggcgagagttcagtgccaacaaccccttcaagggcagc
tcggcggcggcggccgcggccgctgtggctgcggctgtggagaccgtcaccacctccccg
gggctccccgccagcccccagccctctgccctgcccaccgtcatcaggaaggccaagacc
aaggagggaaagggtccaggtgtacggaagaaaatcaagggctccaaagacgggaagaaa
aaggggaaagggaaaaagacggcaggcttgaaatttcggtttggaggaatctccagcaaa
aggaaaaagggctcctctagcgaagaggaggagcgggaggaatccgactttgacagtgcc
agcatcaacagcagctccgtgcgctccgagtgctcagctgggctggggaagagagggaag
aagaggaaaaagaaaaagaggattgaagagggggatggctacgagaccgaccaccaggac
tactgcgaggtgtgccagcagggcggggagatcatcctgtgtgacacctgtccccgcgcc
taccacctggtctgcctggaccccgagctggagaaggcccccgagggcaagtggagctgc
ccccactgtgagaaggagggcatccagtgggagccgaaggaggaggaggaggaggaagag
gatggcggtgaggaggaggaggaggatgaccacatggagttctgcagggtgtgtaaggac
ggaggggagctgctgtgctgtgacacctgcccgtcctcctaccacctccactgcctgaac
ccgccactgccagagatcccaaacggggaatggctctgcccacgctgtacttgccctccc
ctgaagggcaaggtgcagcgcatcctgcactgggcgtggagggagccgcctgccccgccg
ccgcccgccgccgccccgcagcagccagcgctgccgccgcccaaggcgctggaggggatc
ccggagagagagttctttgtgaaatgggccggcctgtcctactggcactgctcctgggtc
aaggagctgcagctggagctgtaccacaccgtgatgtaccgcaactaccagcgcaagaac
gacatggacgagccaccggcctttgactacggctctggggacgaggacagccagagggag
aagaggaagaacaaggacccccagtatgccaagatggaggagcggttctaccgctacggc
atcaaacccgagtggatgatgatccaccgcatcctgaaccacagctttgataagaaggga
gacatccattacctgatcaagtggaaggacctgccctatgaccagtgcacctgggagatc
gatgacatagacatcccctactatgagaacctcaaactcctctactggaaccacagggag
ctgatgctgggggaggacacgcgccctctgaagaagctgaacaagaaagggaaaaagctg
aaagaggagaagctggaaaagcctccagaaacacctcttgtggatcctacagtgaagttt
gacaagcagccgtggtacatcgatgccacgggaggcacgctgcacccttaccagctggaa
gggctcaactggctgagattctcctgggcacaagggacagatacaatcctggctgatgag
atggggctggggaagacagtgcagaccattgtgttcttgtattccctgtacaaggagggc
cactccaaggggccgtacctggtcagtgcccccctgtccaccatcatcaactgggagcgg
gagtttgagatgtgggcgcctgacttctacgtggtgacctacacgggggacaaggagagc
cgctcggtcatccgggaaaatgagttttcttttgaggacaacgccatccgcagcgggaag
aaggtcttcaggatgaagaaggaagcccagatcaagttccacgtcctgctcacgtcctat
gagctgatcactattgaccaggcagtgctgggctccatagagtgggcctgtctggtggtg
gatgaagcacacaggctgaagaacaaccagtccaaattctttagagtgctgaatagctac
aagatcgattacaagctgctcctcacagggactccgctccagaacaacttggaggagctc
ttccacctgctcaatttcctgactccagagagatttaacaacctggaggggttcctggag
gagtttgcagacatctccaaggaggaccagatcaagaagctccacgacctgctgggtccc
cacatgctgcggcggctcaaggctgatgtgttcaagaacatgccggccaagacggagctg
atcgtgcgtgtggagctgagccagatgcagaagaaatactacaaattcatactgacaagg
aactttgaagccctgaattcgaaaggtggtgggaaccaggtctcactgctcaacatcatg
atggacctgaagaagtgctgcaatcacccatacctgttccctgtggcagctgtggaggcc
cctgtgctacccaatggatcttatgatgggaattctttggtcaaatcttctgggaaactg
atgctgctccaaaagatgctgaagaagttgcgggatggcggtcacagagttctgatcttc
tcgcagatgacaaagatgctggatttgctggaggatttcctggagtatgaaggctacaag
tacgagcgcattgacgggggcatcaccggcgggctgcgccaggaggccatcgacaggttc
aatgctcctggggctcagcagttctgcttcctcctctccacccgcgccggtggtctgggc
ataaaccttgctacggccgacactgtcattatttatgattctgactggaatccccacaat
gacatccaggcgttcagcagagctcaccgcatcgggcagaacaagaaggtgatgatttac
cgcttcgtgaccagggcctctgtggaggagcgcatcacccaggtggccaagaggaagatg
atgctcacacacctggtggtgcgcccggggctcggctccaagtcaggctccatgaccaaa
caagagctggatgacatcctcaagttcgggacagaagaactcttcaaggatgatgtggaa
ggcatggtgtctcagggacagaggattgcaatgcctgatgctgttacccctttctcagac
acactgtcaacaaaagggggtgcagcagcccctggcatgaaaaaaaagcatggtagcacc
ccaccaggtgacaataaggatgtagatgacagcagtgtgatccactatgatgacgctgcc
atctcgaagcttctggaccgaaaccaggatgcgacggacgacacggagctgcagaacatg
aatgagtatctcagctcctttaaagtggcccagtatgttgtgagagaagaggatggtgtg
gaggaggtggaacgggagatcatcaagcaagaggagaatgtggaccctgactactgggag
aagctgctgcggcaccactatgagcagcagcaggaggatctggccaggaacctgggcaag
gggaagagaatccgcaagcaagtcaactacaatgacacctctcaggaggaccaagagtgg
caggacgagctctctgacaaccagtcagagtattccattggctctgaggatgaggatgaa
gactttgaagagaggccagaaggccagagtggcagaagacaatcacggagacagctgaag
actgacagagacaaacctctccctcctttgctggcaagagttgggggaaacatcgaggtt
ctgggtttcaacgcccggcagcgcaaggcgttcctgaacgccatcatgcgctggggaatg
ccgccccaggatgccttcaactcccactggctggtccgggatctgcgggggaagagtgag
aaggagttcagggcatatgtgtccctgtttatgagacacttgtgtgagcctggggccgat
ggtgctgagacatttgcggacggcgttccccgggaaggactgtctcgccagcacgtgctc
acccgcatcggggtcatgtcactagtaaggaagaaggtccaggagttcgagcatgtcaat
gggaagtacagcaccccagacctgcttctggagggcccagagagcaagagatccagcgag
gtcgtgtcttcagatcccaacacgcctgtcccagccagcccagcacacacacacgcgggg
ccaggggcccttgcagacaaaacagaagcacagctggggttccatgaggaaaaggagctg
gtggaacagaagagcagaaaggtgtctgacagccaggtacctgcaagtggtgaggtggag
agtgaagagcccccagaaagctgtgacagcaaggagaggccaaggaaagagaagcaagag
gattgtgaaaaggctgagccttcctctgagcccctggtgaaaggcctgttccctcctgca
gacgaggggattcaagagcaggagaagcctttggagaaggcagagctgagcagcagccca
gggaagggggaggataaagaagtcaaaccagaggatggcaaggaggaggagaaggaacca
agtgatgcccagcaaaatggtgacaaagaggaagaggaggaagggaagaaggatgacaga
aacattaacttcagattcatgttcaacattgctgacggtggcttcacagagctgcacacg
ctgtggcagaatgaggagagggctgccatgtcctctggcaagatctacgacatctggcac
cgccgacacgactactggctgctggcaggaattgtcacccatggctatgcccgctggcag
gacatccagaacgacccacggtacgtgatcctgaacgagcccttcaagtcagagatacac
aaggggaactaccttgagatgaagaacaagttccttgcccggcgttttaagttgctggag
caggccctggtgatcgaggagcagctgcggagggcggcgtacctcaacatgacccaagac
cccagtcacccggccatggctctgaatgcacggctggcagaagtggagtgccttgctgag
agccaccagcacctctccaaagagtccctggctgggaacaagcctgccaacgctgtcctg
cacaaggtgctgaaccagcttgaggagctgctgagtgacatgaaggctgatgtgacacgc
ctgccctccatgctgtcccgcatcccgcccgtggctgcccggctgcagatgtcagagcgg
agcatcctcagccgcctggccacccgaggaggggacccagctgcccagggctcctttggc
tctgccccgatcttcaacaacagctttgggccaaatttccgtggtcctgggccaggtggg
attgtcaactacagccagatgcctctgggaccctatgtgactgatatttag
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integrated database retrieval system
