Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456588
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Entry
135456588 CDS
T09958
Symbol
USP48
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48 isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
zle01002
]
135456588 (USP48)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135456588 (USP48)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135456588 (USP48)
Peptidases and inhibitors [BR:
zle01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
135456588 (USP48)
Ubiquitin system [BR:
zle04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135456588 (USP48)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
UCH_1
ubiquitin
Motif
Other DBs
NCBI-GeneID:
135456588
NCBI-ProteinID:
XP_064586613
LinkDB
All DBs
Position
21:5467971..5504129
Genome browser
AA seq
1027 aa
AA seq
DB search
MAPRLQLEKAAWRWTETVPPEAVAQEHIEAAYRVRLEPCQRGACRRNCRGNPNCLVGIGE
HAWLGEIDENSFHNIDDPNCERRKKNAFVGLTNLGATCYVNTFLQMWFLNLELRQALYLC
PSACGDGVPKDTDYEPQTICEHLQYLFALLQNSKRRYIDPSAFVKALGLDTGQQQDAQEF
SKLFMSLLEDTLSKQKNPDVRNIVQKQFCGEYAYVTVCNQCGRESKLVSKFYELELNIQG
HKQLTDCITEFLKEEKLEGDNRYFCETCQSKQNATRKIRLLSLPCTLNLQLMRFVFDRQT
GHKKKLNTYIGFSELLDMEPFMEQKNGVYVYELSAVLIHRGVSAYSGHYIAHVKDPQTGE
WYKFNDEDIEKMEGKKLQLGIEEDLAEPSKSQTRKPKCGKGTHCSRNAYMLVYRLQAREK
SLTVQVPAFLQELVERDNCKFEEWCNEMAEMRKQSVARGKIKHEEVKELYQRLPAEAGSP
YDFISLEWLQKWLDESTPPKPIDNTACLCSHGKLHPDKISLMKRISEYVADFFYRRYGGG
PRLNVKALCKDCVVERCRILRLKNQLNEDYKTVTNLLKMTVKGTDGFWVGKASLRSWRQL
ALEQLNEQDEDAEHSNGKMNGNAQNKDESNEEKREEEEELNFNEDIVCPHGDLCISENER
RVVSKEAWEKLKQYFPKAPEFPNNKECCSQCKILEREGEENEALHKMMASEQKTSLQNLF
HDKCRPCLGSWPQETDELYIVSQFFVEEWRKFVRRPTRCSPVSSIANSVLLCPHGGLMFT
FASMTKEDSKHIALIWPSEWERIQKLFVVDHVIKITRSQTAEGARYASEPQLCPECREGL
LCQQQRDLREYTQATIYIHKVVDNKKVMKDAAPELNVSSSEAEEEREENKPEGEQDPDFN
QANGGTKRQKLSHQSYITYQKQGIRRSTRHRKVRGEKALLVSASQTLKELKIQIMHAFSV
APFDQNLSLDGKMLSDDTATLGSLGVIPESVILLKADEPIADYAAMDDVMHVCMPEEGFK
GTGLLGH
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcggctgcagctggagaaggcagcgtggcgctggaccgagacggtgccgccc
gaggcggtggcgcaggagcacatcgaggcggcctatcgcgtccggctggagccctgccag
cgcggagcctgccggaggaactgccgggggaaccccaactgcctggtgggcatcggggag
cacgcgtggctgggcgagatcgatgagaacagcttccacaacatcgacgaccccaactgc
gagcgccgcaagaagaatgccttcgtgggcctgaccaacctgggtgccacgtgctacgtc
aacaccttcctgcagatgtggttcctgaacctggagctgcggcaggcgctctacctgtgc
cccagcgcctgcggggacggcgtgcccaaggacacggactatgagccccagaccatctgt
gagcacctgcagtacctgtttgctctgctgcagaacagcaagcggcgctacatcgacccc
tcagcctttgtcaaggcgctggggctggacacggggcagcagcaggatgcccaggagttt
tccaagctgttcatgtccctgctggaagatactttgtccaaacagaaaaacccagatgtc
cggaacattgtgcaaaagcagttctgtggagagtatgcctatgtcacagtctgcaaccag
tgcggcagagaatctaaactggtgtctaaattttacgagctggagttaaacatccaagga
cacaagcagttgacagactgtataacagaattcctcaaggaggaaaaattagaaggggac
aatcgttatttttgtgagacttgtcagagcaagcagaatgccacgaggaagatccggctg
ctcagcctgccctgcaccctcaacctgcagctcatgcgctttgtgtttgacagacaaact
ggccacaagaagaagctgaacacctacattggcttctcagagctgctggacatggagcct
ttcatggagcaaaaaaacggggtgtacgtgtacgagctgagcgctgtgctcatacaccgt
ggagtaagcgcctactccgggcactacatcgcccacgtgaaggacccacagacaggagag
tggtacaagttcaacgatgaagacatcgagaagatggaggggaagaaactccagctggga
attgaggaagatttagcggagccatcgaaatcccagacccgcaagcccaagtgcggcaag
ggcacgcactgctcccgcaacgcctacatgctggtgtacaggctgcaggcccgggagaaa
tccctcactgtgcaggtgccagcttttctgcaggagctggtagagcgggataactgcaag
tttgaggagtggtgcaacgaaatggccgagatgcgcaaacagagcgtggccagaggcaag
atcaagcacgaggaggtgaaggagctctaccaaaggttacccgccgaagctggttcccct
tacgacttcatctctctggaatggctgcagaagtggctggatgagtccactcctcccaaa
cctattgataacacagcctgcctgtgctcccatggcaaactccatcctgataagatctcc
ctgatgaagaggatatcagaatacgtggccgatttcttctaccgccgatacggaggaggg
ccccggctcaacgtcaaagcactttgcaaggactgtgtggtggaaaggtgtcggatcctg
aggctgaagaaccagctgaacgaggactacaaaacagtcaccaacctgctgaagatgaca
gtcaaagggaccgatgggttttgggttggaaaagcctccttgaggagctggcgtcagctg
gctctggagcaattaaatgagcaagatgaagatgcagagcacagtaatggaaaaatgaat
ggaaatgcacaaaacaaagatgaatcaaatgaagagaagagggaggaggaagaggagtta
aattttaatgaagacatcgtttgcccacatggtgacctgtgcatctctgagaatgaacgg
agggtggtttccaaggaagcctgggagaaactcaagcaatattttccaaaagcccctgaa
ttcccaaacaacaaagagtgctgttcccagtgcaagattttggagcgtgaaggggaggaa
aatgaagctctgcataagatgatggccagtgagcagaagacttctctgcagaacctgttc
catgataaatgcaggccttgcctgggcagctggcctcaggagacggatgagctgtatatt
gtttcgcagttctttgtagaagaatggaggaaatttgtcaggaggccgacgcgctgcagc
cccgtgtcctccatagccaacagtgtcctgctctgtccccacggggggctcatgttcacc
tttgcttccatgaccaaagaagactccaaacatatagctctgatatggcccagtgagtgg
gagaggatccaaaagctctttgtcgtggatcacgtcatcaaaatcacccggagccagacg
gccgagggcgcccgctacgcctccgagccccagctgtgccccgagtgccgggaggggctc
ctgtgccagcagcagcgggacctgcgcgagtacacccaggccaccatctacatccacaaa
gtggtggacaacaaaaaggtaatgaaggacgcggctccagagctgaacgtgagcagctcg
gaagctgaagaggaaagggaggaaaacaagccagagggggagcaagatcctgattttaac
caggccaatggtggcacgaaacgccagaagctgtcccaccagagctacatcacctaccaa
aagcagggaatcaggaggagcacgcggcaccgcaaggtgcggggcgagaaagcgctgctg
gtgtcagccagccagaccctgaaagagctgaaaatccagatcatgcacgccttctccgtg
gcccccttcgaccagaacctgtccctggatgggaagatgctgagtgatgacacggccacg
ctgggcagcctgggagtcatccccgagtctgtcatcctgctcaaggctgacgagcccatc
gcggattacgcggccatggacgacgtcatgcacgtttgtatgcctgaagagggatttaaa
gggactggtttgcttggccactga
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