Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456708
Help
Entry
135456708 CDS
T09958
Symbol
CLSTN1
Name
(RefSeq) calsyntenin-1 isoform X1
KO
K22659
calsyntenin 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135456708 (CLSTN1)
Cell adhesion molecules [BR:
zle04515
]
Cadherins
Cadherin related
135456708 (CLSTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
Glyco_hydro_16
EphA2_TM
V_ATPase_I
PFF1_TM
Cadherin_C_2
SID-1_RNA_chan
Zip
Neur_chan_memb
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
135456708
NCBI-ProteinID:
XP_064586818
LinkDB
All DBs
Position
21:complement(970655..1001657)
Genome browser
AA seq
970 aa
AA seq
DB search
MPAPAARLLLAALLCGAAAAARVNKHKPWIETTYHGIVTENDNTVLLDPPLIALDKDAPL
RFAESFEVTVTKEGEICGFKIHGQNVPFEAVVVDKSTGEGIIRSKEKLDCELQKDYTFTI
QAYDCGKGPDGANAKKSHKATVHIQVNDVNEYAPVFKEKSYKATVIEGKRYDNVLKVEAV
DADCSPQFSQICSYEIVTPDVPFAIDKDGYIKNTEKLSYGKEHQYKLTVTAYDCGKKRAA
EDVLVKISVKPTCKPGWQGWSKRIEYEPGTGSLALFPGMHLETCDEPITSVEATVELETN
HIGKGCDRDTYSEKSIHRLCGAASGTAELLPPPSSAANWTVGLPTDNGHDSDQVFEFNGT
QAVRIPDGVVTVNLKEPFMISVWMRHGPGTKEKETILCNSDKTDMNRHHYALYVHNCRLV
FLFRQDPSQGKSYQPAEFHWKLNQVCDKEWHHYVVNVEFPAVSLYVDGVSYDPFPVTEDY
PLHPSKIETQLVVGACWQEYTGSENDNETVPETSAGGELRMAQFFRGNLAGLMIRSGKLE
NKKVIDCLYTCKEGLDLQMADGVGKGVKIHMNPSQSTLTIEGDDIDRVDKAMQHISYLNS
RQFPTPGIRRLKVTSTVRCFNEEACVSIPSVEGYVMVLQPEEPKISLSGINHFARSASEF
ESSEGVSLFPELRIISTITREVEPEGDGGEDPTVQESLVSEEIMHNLDMCEVTVLGEELN
QEQESLEIDMTRLQQKGIEMSSSNLGMIITGVDTMANYEEVLHLIRYRNWRTASLFDRKF
KLLCSELNGRYVSNEFQVEVNVIHTASPVEHANHIAAQPQFIHPVHHSFVDLSGHNLANP
HPFSVVPSTATVVIVVCVSFLVFMIILGVFRIRAAHQRTMRDQDTGKENEMDWDDSALTI
TVNPMETYEDQHSSEEEEEEEEEESEDGEEDDITSAESESSEEEEGEQEEDQQNVNRQQQ
LEWDDSTLSY
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgccggcccccgccgcccgcctgctgctcgccgcgctgctctgcggagcggccgcggcc
gctcgagtgaacaagcataagccatggattgaaacaacctatcatggcatagttacagaa
aatgacaacacggtgctcctggacccccctctaatagccctggacaaagatgcacctctg
cgatttgcagagagttttgaggtgacagtcaccaaagaaggtgagatttgtgggtttaaa
atccacgggcagaatgttccctttgaagcagtggtagtggataaatccactggtgaggga
atcatacgctccaaggagaagctggactgtgagctgcagaaggactacacgttcaccatc
caggcctacgactgtgggaagggaccagatggagcaaatgccaaaaaatcccacaaggcc
acagttcacatccaggtgaacgatgtgaacgagtacgccccggtgttcaaggagaagtcc
tacaaggccacggtcatcgagggcaagaggtatgacaacgtgctcaaggtggaggccgtg
gatgcagattgctccccccagttcagccagatctgcagctacgagatcgtgactccagat
gtgccctttgccatcgacaaggacggttatataaaaaacacagaaaagttgagctatggt
aaagaacaccagtataaactgacagtaacagcctatgactgtgggaagaagagagctgct
gaagatgtgttggttaaaattagcgttaagcctacgtgcaagcctggctggcaaggttgg
agcaaaagaatagaatacgagcctggcactggttctttggctctgttccctgggatgcat
ttggagacatgtgatgagccaataacctcagtggaagcaacggtggaactagaaaccaac
catattggtaaaggctgtgatagagacacctactctgagaaatccatccacaggctttgt
ggtgctgcctctggcacagctgagctgctgccccctcccagcagtgctgctaactggact
gtggggctgcccacggacaatggccatgacagcgaccaggtcttcgagtttaatggcacc
caggctgtgaggattccagatggtgttgtcacagtcaatctcaaagagcccttcatgatt
tcagtgtggatgaggcacgggcccggaaccaaggagaaagagacaattctgtgcaattca
gacaagacagatatgaaccggcaccactacgccctgtacgtgcacaactgccgcctggtg
ttcctgttccgccaggacccctcccagggaaagtcctaccagcctgctgagttccactgg
aagctcaatcaggtgtgtgacaaagagtggcaccactacgtggtcaacgttgaatttcct
gcagtgtctctgtacgtggatggggtttcctatgatcccttcccagtcactgaggattac
ccactccacccttccaagatagaaacacagctggtggttggagcatgctggcaagaatat
acaggaagtgaaaatgacaatgaaactgtgcccgagacctctgcaggtggcgaactgcgc
atggctcagtttttccgaggcaacctggcagggttgatgatccgttctggcaaactggag
aacaagaaggtgattgattgcctctacacctgcaaggaggggctggatttgcagatggct
gatggtgttggcaaaggtgtgaagatccacatgaacccgagccagtcaacgctgaccata
gaaggggatgacattgacagagtggacaaggccatgcagcacatttcctacctgaactcc
cgccagttcccaacccctggcatccgcaggctgaaggtcaccagcactgtcaggtgtttc
aatgaagaggcctgtgtgtccattccctctgtggagggctatgtcatggtcctgcagcca
gaggagccaaaaatcagcctgagtggcatcaaccactttgcccgctccgcctccgagttc
gagagctccgagggcgtgtccctgttcccggagctgcgcatcatcagcaccatcacccgg
gaggtggagcccgagggggacggcggggaggatcccacagttcaagagtctttggtatct
gaagagatcatgcacaacctggatatgtgtgaggtgacggtgctgggagaggaactaaat
caggaacaagagagcctggagattgacatgacacgattgcagcagaaaggcattgagatg
agcagttccaacctgggcatgataatcacaggggtggacaccatggccaactacgaggag
gttctgcacctgatccgctacaggaactggcgcacggcgtccctgttcgacaggaagttc
aagctgctctgctcggagctcaacgggcgctacgtcagcaacgagttccaggtggaggtg
aatgttatccacacagccagcccagtggaacatgccaatcacattgctgcacagccacag
ttcattcacccagtgcatcattcctttgttgatctctctggtcacaacttggcaaaccct
catcccttttcagttgtgcccagcacagccacggtggtgatcgtggtgtgtgtgagcttc
ctggtgttcatgatcatcctgggcgtgttccggatccgcgccgcgcaccagagaaccatg
cgggaccaggacacgggcaaggagaacgagatggactgggacgactctgccctcaccatc
actgtcaaccccatggagacatatgaggatcaacacagcagtgaagaggaggaggaagag
gaggaagaagaaagtgaagacggagaagaagatgacatcactagtgcagagtctgaaagc
agtgaggaggaagagggagagcaggaggaggaccaacagaatgttaacagacagcagcag
ctggaatgggatgactctaccctcagttattga
DBGET
integrated database retrieval system
