Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456779
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Entry
135456779 CDS
T09958
Symbol
RERE
Name
(RefSeq) LOW QUALITY PROTEIN: arginine-glutamic acid dipeptide repeats protein
KO
K05628
arginine-glutamic acid dipeptide repeats protein
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135456779 (RERE)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
135456779 (RERE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
BAH
GATA
ELM2
Myb_DNA-binding
DUF7952
DUF7573
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
135456779
NCBI-ProteinID:
XP_064586950
LinkDB
All DBs
Position
21:complement(585268..751799)
Genome browser
AA seq
1515 aa
AA seq
DB search
MTADKEKDKEKEKDRDRDRERDKERDKRDKARESESSRPRRSCTLEGGAKNYAESEHSED
EDNDNNSATTEESAKKSKKKPPKKKSRYERTDNGEITSFITEDDVVYRPGDCVYIESRRP
NTPYFICSIQDFKLSKRDHLLMNVKWYYRQSEVPDSVYQHLVQDRHNENDSGRELVITDP
VIKNRELFISDYVDTYHAAALRGKCNISHFSDIFAAREFKARVDSFFYILGYNPETRRLN
STQGEIRVGPSHQAKLPELQPFPSPDGDTVTQHEELVWMPGVNDCDLLMYLRAARSMAAF
AGMCDGGSTEDGCVAASRDDTTLNALNTLHESNYDAGKALQRLVKKPVPKLIEKCWTEDE
VKRFIKGLRQYGKNFFRIRKELLPNKETGELITFYYYWKKTPEAASSRAHRRHRRQAVFR
RIKTRTASTPVNTPSRPPSSEFLDLSSASEDDFDSEDSEQELKGYACRHCFTTTSKDWHH
GGRENILLCTDCRIHFKKYGELPPIEKPVDPPPFMFKPVKEEDDGLSGKHSMRTRRSRGS
MSTLRSGRKKQAASPDGRASPIAEDVRSSGRNSPSAASTSSNDSKAESVKKSTKKIKEEV
SSPLKNSKRQREKAASDTEEPDRSNAKKSKTQEMSRPNSPSEGEGEGESSDSRSVNDEGS
SDPKDIDQDNRSTSPSIPSPQDNESDSDSSAQQQVLQAQPQVLQAAGGSAQAAAPTPPAP
APLPAPPPASSAAPAPTQASPPVSQPSGQPQPSAAPAPHSHIQQAPALHPQRIPSPHPPL
QPLSVSQSQPAPAPAQPPLHGQPQPAPHALQAQPLLPHGPGAAQPFSLPAQPAQSQVPLQ
TQAPSHSHSGLQAAQPVLPGSASLQPAQPPREQPLPPAPMAMPHIKPPPTTPIPQLPTAP
AHKHPPHLSGPSPFSMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLQSSQAQ
PPVLTQSQSLPPPASHPPPTPXVSALLQPFCPGPPSHPPSCPSTSTPPTVPGIPLQPPIS
TSPASSGTVPVVTACTLPPIQIKEEVPDEAEEPESPPPPPRSPSPEPTVVDIPSHASQSA
RFYKHLDRGYNSCSRADLYFMPLAGSKLAKKREEAIEKAKREAEQKAREEREREKEKEKE
REREREREREAERAAKVSSSSHEGRLGESQLSGPAHMRPSFEPPPTTIAAVPPYIGPDTP
ALRTLSEYARPHVMSPTNRNHPFFVPLNPTDPLLAYHMPGLYNVDPGIRERELREREIRE
REIRERELRERMKPGFEVKPPELDALHPATNPMEHFARHGALTIPPAAGPHPFASFHPGL
NPLERERLALAGPQLRPEMSYPDRLAAERIHAERMASLTNDPLARLQMFNVTPHHHQHSH
IHSHLHLHQQDPLHQGSAGPVHPLVDPLAAGPHLARFPYPPGTIPNPLLGQPPHEHEMLR
HPVFGTPYPRDLPGAIPPPMSAAHQLQAMHAQSAELQRLAMEQQWLHGHPHMHGGHLPSQ
EDYYSRLKKEGDKQL
NT seq
4548 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggacaaggagaaggacaaagagaaggagaaggacagggacagggaccgggag
cgggacaaggagcgcgacaagcgggacaaggcgcgcgagagcgagagctcgcggccccgg
cgcagctgcaccctcgagggcggcgccaagaactacgccgagagcgagcacagcgaggac
gaggacaacgacaacaacagtgccaccaccgaggagtcggccaagaagagcaagaagaaa
ccccccaagaagaagtcgcgctacgagagaaccgacaacggcgagatcacgtccttcatc
accgaggatgacgtggtctacaggcccggagattgcgtttatatcgaaagccgccggccg
aacacgccctatttcatctgcagcattcaagacttcaaactgagcaagagggaccatctg
ctgatgaacgtcaagtggtactaccgccagtccgaggtgcccgactcggtgtaccagcac
ctggtgcaggacaggcacaacgagaacgactcgggacgggagctggtcatcaccgacccc
gtgatcaagaaccgcgagctcttcatctccgactacgtggacacgtaccacgctgctgcc
ctcagagggaagtgcaacatctcccatttctctgacatatttgctgctagagagttcaag
gcacgagtggattcatttttctacatcctgggctacaatccagagacaaggaggctgaac
agtacccaaggtgaaatcagagtgggacccagccaccaggccaagctccccgagctgcag
ccgttcccatccccggacggggacacggtgacccagcacgaggagctggtgtggatgccc
ggagtcaacgactgcgacctgctgatgtacctgagggcagccaggagcatggcagccttt
gcagggatgtgtgacgggggctccacagaggacggatgcgtggctgcctcgcgggacgac
accaccctgaatgccctgaacacgctccatgaaagcaactacgatgctgggaaagccctg
cagcgcctggtgaagaaacctgtgccaaagctgattgagaagtgttggactgaggatgaa
gtgaaacggtttattaaggggttgaggcagtacggcaagaacttcttcagaatccgaaag
gagttgcttcccaataaggagaccggggagctgatcaccttctattactactggaagaag
acccccgaggcggcgagctcgcgcgcgcaccggcggcaccggcgccaggccgtgttccgc
aggatcaaaacccgcacggcctccacgcccgtcaacaccccctccaggcccccctccagc
gagttcttggacctgagctcggccagtgaggatgactttgacagcgaggacagcgagcag
gagctgaagggctacgcctgccgccactgcttcaccaccacctccaaggactggcaccac
gggggccgggagaacatcctgctgtgcaccgactgccgcatccacttcaagaagtacggg
gagctgccgcccatcgagaagcccgtggaccccccgccctttatgttcaagcctgtgaag
gaggaagacgatggcctcagtgggaagcatagcatgaggacacggcgcagtcgaggctcg
atgtcgactctacgcagtggcaggaagaagcaggcggccagccccgatggccgcgcctcg
cccatcgccgaggacgtgcgctccagcggccgcaactcgcccagcgccgccagcacctcc
agcaacgacagcaaggccgagtccgtcaagaaatccaccaagaagataaaggaagaggtt
tcttctcctctcaagaactccaagaggcagcgggagaaggcagcgtctgacacggaggaa
cctgacaggtccaatgccaaaaaatccaaaactcaagagatgagcaggcccaactccccc
tcggagggagagggcgagggcgagagctccgacagccgcagcgtcaacgacgaggggagc
agcgaccccaaggacatcgaccaggacaaccgcagcacgtcccccagcatccccagcccg
caggacaacgagagcgactcggactcctcggcccagcagcaagtgctgcaggcgcagccc
caggtgctgcaggccgcgggcggctctgcccaggctgcagctcccacgccgccggcgccg
gccccgctgccggcaccgccacccgcgtccagcgccgccccggcgcccacgcaggcgtcg
ccgcccgtgtcccagccctcgggccagccccagccctccgctgcccccgctccccactcg
cacatccagcaggcccccgcgctgcacccacagagaatcccgtccccccaccctcccctg
cagcccctgagcgtgtcccagagccagcccgcgcccgccccggcgcagcccccgctgcac
gggcagccccagcctgccccgcacgccctgcaggcgcagccgctgctgccccacggcccc
ggcgctgcccagcccttctccctgcccgcccagcccgctcagtctcaggtgcccctccag
acacaggccccgtcccactcgcactcggggctgcaggcggcgcagcccgtgctgcccggc
tcggcctcgctgcagccggcgcagcctccccgtgagcagcctctgccgcccgcccccatg
gccatgcctcacatcaaacccccccccaccacccccatcccgcagctgcccaccgccccg
gcccacaaacaccctccccatctctcggggccctctcccttctccatgaactccaacctg
cccccgccgcccgctctgaagccgctgagctcgctgtccactcaccaccctccctcggcg
caccctcctcccctgcagctgatgcctcagagccagcctctgcagtcctctcaggcccag
cctccggttctgacccagagccagagccttccccctcctgccagtcacccccctccgact
ccataggtctccgcccttctccagcccttttgcccggggcccccttctcaccctccgtcg
tgcccctccacctccacgccgcccaccgtgcctggcatccccctgcagccccccatctcc
acgtcaccagcctctagtgggacagtgcccgtggtgacagcctgcacgctgccacccatc
cagatcaaggaggaggtccccgatgaggctgaggagcccgagagccctccgcccccaccc
cggagcccatccccagagcccacggtggtggacatccccagccacgccagccagtcagcc
aggttctataaacacctggaccgtggctacaattcatgctccagggcagacctgtacttc
atgcctctggcaggctccaaactggccaagaagagagaagaggccatcgaaaaggccaaa
agggaagcggagcagaaagccagggaagagagggaaagagaaaaagagaaagagaaggaa
agagagcgggagcgggagcgtgagagagaagcggaaagagctgcgaaggtgtccagctcc
tcccacgagggccgcctgggcgagtcccagctcagcgggccggcccacatgagaccctcc
ttcgagccgccgcccaccaccatcgcggccgtgccgccgtacatcgggccggacacgccg
gcgctgcggacgctcagcgagtacgcgcggccccacgtcatgtccccgaccaaccgcaac
caccccttcttcgtgcccctgaaccccacggacccgctgctggcctaccacatgcccggc
ctgtacaacgtggaccccggcatccgcgagcgggagctgcgcgagcgcgagatccgcgag
cgcgagatccgcgagcgggagctgcgcgagaggatgaagcccggcttcgaggtgaagccg
ccggagctggacgcgctgcacccggccaccaaccccatggagcacttcgccaggcacggg
gcgctgaccatcccgcccgccgcggggccgcaccccttcgcctccttccacccggggctc
aacccgctggagagggagagactggcgctggcggggccgcagctgcggccggagatgagc
tacccggacaggctggcggccgagcgcatccacgccgagcgcatggcctcgctcaccaac
gaccccctggcgcggctgcagatgttcaacgtcaccccccaccaccaccagcactcgcac
atacactcgcatctacacctacaccagcaggaccccctacaccaaggctcagcaggacct
gtccatcccctggtggatcctttagcagctggaccccacctggcacgttttccctaccca
cctgggaccatccccaacccattgctagggcagccacctcacgagcatgaaatgctccgg
catccagtctttggtaccccctaccctcgggacctgcctggggccatcccccctcccatg
tcagcagcccaccagctgcaggccatgcacgcgcagtcggcggagctgcagagactggcc
atggagcagcagtggctgcacggccacccccacatgcacggcgggcacctacccagtcag
gaagattactacagtcggctgaaaaaagaaggcgacaaacagttgtaa
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