Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456781
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Entry
135456781 CDS
T09958
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X1
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle00310
Lysine degradation
zle01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
135456781 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135456781 (PRDM2)
03036 Chromosome and associated proteins [BR:
zle03036
]
135456781 (PRDM2)
Enzymes [BR:
zle01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
135456781 (PRDM2)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
135456781 (PRDM2)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
135456781 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-H2C2_2
zf-C2H2_ZNF462_1st
zf-C2HE
zf-C2H2_11
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
135456781
NCBI-ProteinID:
XP_064586952
LinkDB
All DBs
Position
21:complement(4350896..4415726)
Genome browser
AA seq
1695 aa
AA seq
DB search
MNQNTSDSPVAVETLDDVPEHVLRGLPEDVRLFPSAVDKTRLGVWATKSILKGKKFGPFV
GDKKKRSQVKSNVYMWEVYYPNLGWMCVDATDPEKGNWLRYINWARSGKEQNLFPLEINR
TIYYKSLKPIAAGEELLVWYNGEDDPAIAAAIEEERASARSRRHSPKARRGKKKTQESKN
KGKKAADTKQKKTDLDSTSADMRDSKEGHKEEDEAPSVSAVLSLEQTAVIQEMVNQDVLP
KLMVPSPTNETQVITEDKQGEAINCASDDLDDDEEEDEEEEDEEEIEDTNMPKENAEMPL
ICEEKLDSMEEQKSTSEESPESSPKKKLVVKIPKAEGESNGDVQETFMFPCQHCERKFTT
KQGLERHMHIHISTLSHAFKCRYCGKAFGTQINRRRHERRHEAGPKRKPFLTLTSSQHLD
NVADNQVIVDDGLKDDLNVSSLVQDSVVLDSEKVSQEMSNSAFAEENKEPKELHPCKYCK
KVFGTHTNMRRHQRRVHERHLIPKGVRRKGFFTEEPPLPTEPAPAVQSVYIASTEIEEEG
EGDDVYLMDISSNISENLNYYIDGKIQSNSSTSNCDVIQMESNSADLYGLNCIISPVTVE
ISTNLKVTQTHVNEPPKEPSSSGSSESKKRRTASPPLVPKIKTEIDPEPITPTSSLNLPL
SISTESLTFHKEKGVYLSSKLKQLLQTQDSKKITPSSEIPKIGPSVTSSSVLPPVSSRFK
RRTSSPPSSPQHSPVLRDFVKSGEGKTVWNDNIRSSKMPKLESHSNSPAWSLAAREDKET
LSPHCFEEYKISKDWTAAPTFGNVCNQQPLDLSSGMKQRSDVKSKTQVPWESVLDLSVHK
KPCSDAETRECKENSSPATCSGVKRKKPTTCMLQKVLLNEYNGTDAAAEQPGTDSASTAP
QPPAEPGTDPAPSAAAASDTQPLSSSAASPVPAVPPAAPAGCQLPPLLTPTNPPSPPPCL
PVLTAATSPPPLLPTMPLPIPDVSASATNTSSCPSPLSNTTTQSPLPVLSPTVSPSPSPV
PSVEPLISAASPGPPNLSSSSSSSSSSSFSSSSSSSSPSPPPLSVVSSVVSSADNLESSL
PIIKQEEAESEQQKAREEPHTSGESGVVQETFNKSFVCNVCESPFLSIKDLTKHLSIHAE
EWPFKCEFCVQLFRDKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDKE
CTHHEFESGTLRPQNFTDPSKANAEHMQNLPEDSLEPSKEEEDEDLNDSSEELYTTIKIM
ASGVKSKDPDVRMGLNQHYPSFKPPPFQYHHRNPMGIGVTATNFTTHNIPQTFTTAIRCT
KCGKSVDNMPELHKHILACASASDKKRYTPKKNPVPLKQTVQPKNGMVVIAGPGKNAFRR
MGQPKRLNFNVEISKMSSNKLKISALKKKNQLVQKAILQKKKSAQQKAELKNNPSETDSH
ICPYCNREFTYIGSLNKHASYSCPKKPISPSSKKNSSKKSAASSPASSDKGSNQRRRTAD
AEIKMQSTQPHLGKTRARTSGPAQLQLPSASFKSKQNVKFVPSMRSKKPNSSSSLRNSSP
VRVSKMSHVDGKKTKVVSKNNSSGISSKASRKLHVRIQRNSKAVLPSKSAVASKKKADRF
SVKSRERIGGPITRSLQQAANAEAAENKRDESSAKQELKDFRLRTASRCPSSSSHSPSSR
QCKKPSSSSSPFFQE
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagaacacaagtgactcccctgttgctgtggagaccttggatgatgttcctgag
cacgtgctcaggggcctgcctgaggatgtgaggctcttcccatctgctgttgacaagact
cggcttggtgtctgggcaacaaaatcaattttgaaaggcaagaagtttggaccatttgtt
ggtgacaagaaaaaaagatctcaagttaagagcaatgtgtacatgtgggaggtgtattac
cccaacctgggctggatgtgtgtggatgccaccgacccagagaagggcaattggctgcgc
tacatcaactgggcacgctcggggaaggagcagaacctcttccccctggagatcaacagg
accatttactacaagagcttaaagccaatcgcggcgggagaggagctgttggtgtggtac
aatggcgaggacgacccggcgatagcggccgcgatcgaggaggagcgagcgagcgcccgc
agccgccggcactccccgaaggcccgcagaggaaagaagaagactcaggaaagtaaaaac
aagggaaagaaggcagcagatacaaaacagaaaaagactgatttggattctacttctgca
gatatgagggattctaaagaaggtcacaaagaggaagatgaagctccttctgtttctgct
gtgctgtctctggagcaaacagctgtgattcaggagatggtaaatcaggatgtccttcca
aagctgatggtccccagtcccaccaacgaaacacaagtgataactgaagacaaacaagga
gaagccataaactgtgcatcagatgatttagatgacgatgaagaggaggatgaagaagag
gaagatgaagaggagatagaagataccaatatgcctaaagaaaatgctgaaatgcctttg
atatgtgaagaaaagttggactccatggaagaacaaaagagtacgtcagaggaatctcca
gaaagctctccaaagaaaaaactcgtggtgaaaatcccaaaagcagagggggaatccaac
ggtgatgttcaggaaaccttcatgtttccttgccagcattgtgagaggaagttcaccaca
aagcaggggctggagcgccacatgcacatccacatctccaccctgagccacgccttcaag
tgccgctactgcgggaaagccttcggcactcagatcaaccggcgccggcacgagcggcgc
cacgaggccgggcccaaaaggaaaccattcctcactctcacctcctcacagcacctggat
aatgttgctgataaccaggtgattgtggatgatggtcttaaagatgacctgaatgtttcc
agtctcgtgcaagactctgttgttttggattctgagaaagtttcccaggaaatgtcaaac
tcggcgtttgctgaggagaataaggagcccaaagaattgcatccgtgcaaatactgcaaa
aaggtttttggtactcacaccaacatgaggaggcatcagcgcagggttcacgagcgtcat
cttattcccaaaggtgtcaggagaaaagggttcttcactgaggagccacctctcccaaca
gagccggccccagccgtccagagtgtgtacatagcaagcacagaaatagaagaggaaggt
gagggagatgatgtctatcttatggatatatccagcaatatctctgagaatttaaattac
tacattgatgggaaaattcagtccaacagcagcactagcaattgtgatgtgattcagatg
gagtccaactctgcagacttgtatggattgaattgtataatcagtccggtcacagtggaa
atttccacaaatttaaaggttacacaaacacatgtgaatgaacctcctaaggaaccctct
agcagtgggagcagtgaatccaaaaagagaagaactgccagccctcctcttgtaccaaaa
ataaaaactgaaatagaccctgaacctataactcctactagttctttaaatcttcctctt
agcatttcaacagaaagcttaacttttcataaagaaaaaggggtttatttgtcatcaaaa
ctaaagcagcttcttcagacacaggacagtaagaagataactccatcaagtgaaatccct
aaaataggaccttctgttacatcatcatctgttttgcctccagtatccagcaggtttaaa
agaaggaccagctctcctcccagctctccacagcacagtccagtgcttcgagacttcgtc
aaatcaggtgagggaaaaactgtgtggaacgacaatattaggagttcaaaaatgccaaag
ttagaaagccacagcaactcacctgcttggagcttggctgcaagggaggacaaagagact
ttgagccctcattgctttgaagaatataaaatatcaaaagactggacagcagctccaact
tttggcaatgtgtgcaaccagcagcccctggatttatccagcggaatgaaacagaggtct
gatgtcaaaagcaagactcaggttccctgggaatccgttttagatctgagtgtgcataag
aagccgtgcagcgatgcagaaacgagggaatgcaaagagaactccagccctgcgacgtgc
agcggggtgaagaggaagaagcccaccacgtgcatgctgcagaaggttctgctcaacgag
tacaacgggacggacgcagccgcggagcagccgggcaccgacagcgccagcacggccccg
cagcccccggctgagcctggcactgatcctgctccctcagcagcggctgccagtgacacc
cagcccctcagctcctctgctgcctcccctgtgcccgctgtgccgcctgctgcccccgct
gggtgccagctgcccccgctgttaacgcccaccaaccccccgtccccgccgccctgcctg
cccgtgctgactgcggccacgtcgccgccccccctgctcccaaccatgcccttgcccatc
ccagatgtctctgccagtgccaccaacacctcctcctgtccctcaccactctccaacact
accacccagtccccattaccagttctttcacctacagtttctccttctccgtcccccgtc
ccttctgttgaacctcttatttctgctgcttcacctggcccccctaacctgtcttcctca
tcttcctcctcctcttcctcctctttctcatcctcttcctcctcatcgtctccatctcca
cctcctctttctgtagtttcttctgttgtttcctctgctgataaccttgaaagttctctc
ccaataataaaacaggaggaagctgaaagcgagcagcagaaagcgagagaggagcctcac
acttcaggtgaatcaggagtggtgcaggaaaccttcaacaagagctttgtgtgcaatgtc
tgcgagtcacctttcctttccatcaaagacctgacgaagcatttatccattcatgctgag
gaatggcccttcaaatgtgaattctgtgtacagctttttagggataaaacagacttgtca
gaacatcgctttctgcttcatggagtagggaatatctttgtttgttcggtgtgtaaaaag
gaatttgcttttttgtgcaatttgcaacagcatcaacgggatctccatccagacaaggag
tgcacacatcatgagtttgaaagtgggactttgagaccccagaattttactgaccccagt
aaggcaaatgcagagcacatgcagaacctgccagaagattctttggagccttcaaaagag
gaggaagatgaagatctaaatgattcttctgaagagctttatactactataaaaataatg
gcttctggagtgaaatctaaagatccagatgtccggatgggcctcaatcaacactaccca
agctttaaaccacctcccttccagtatcaccatcggaatcctatggggattggagttact
gcaacaaacttcacaacccataatatcccacagactttcaccactgccattcgatgcaca
aaatgtggcaaaagtgttgataacatgcctgagttacacaaacacatactggcctgtgca
tctgctagtgataaaaagagatacacacctaaaaaaaatccagttcccctcaaacagaca
gtgcagcctaagaatggcatggtggtcattgctgggcctggcaaaaacgccttcagaagg
atgggtcagcctaaaagactcaatttcaatgtggagatcagcaaaatgtcctccaacaaa
ctaaaaataagtgcattgaaaaagaaaaaccagcttgtacaaaaagctatcctgcaaaaa
aagaaatctgcccagcagaaggcagagctgaaaaataacccatccgagacagactcccac
atctgcccctactgtaacagagagttcacttacattgggagtttgaacaaacacgcatca
tacagctgccccaaaaaacccatctctccctcctccaaaaagaattcttccaaaaaaagt
gcagcttcttcccctgccagcagtgacaaaggcagcaaccagcgcaggcggacggcggat
gcagaaatcaaaatgcagagcactcagcctcacctgggcaagaccagagcacgaacctca
ggacctgcacagctccagctcccctctgcctccttcaaatccaaacaaaacgttaaattt
gtaccttccatgcgatcgaaaaagccaaattcatcttcatccttgaggaactctagtcct
gtgagagtgtctaaaatgtcccacgttgatgggaaaaaaactaaagtggtttctaagaac
aattcctctggaatctccagcaaagcctcccggaaattgcacgtcagaatacaaaggaat
agcaaagctgttttgccaagtaaatctgctgtggcaagtaagaaaaaggcagacaggttc
agtgtaaaatctagagagaggattggaggaccaatcacacggagtctgcagcaggcagca
aatgcagaagcagcagaaaacaaaagagatgaaagcagtgcaaagcaagaactgaaagat
ttcaggctccgcacggcctctagatgtccctcctcatcctcgcatagccccagcagccgg
cagtgcaagaaacccagctccagctcatcccccttcttccaggaatag
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integrated database retrieval system
