Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456896
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Entry
135456896 CDS
T09958
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135456896 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135456896 (RAB11FIP1)
Membrane trafficking [BR:
zle04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
135456896 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
135456896
NCBI-ProteinID:
XP_064587151
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All DBs
Position
22:2582972..2596663
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AA seq
1354 aa
AA seq
DB search
MAAPGWAPTHVRVTVLRARGLRAKAAAGGSDAYAVMALGRDKFRTSVAERCRGEPLWREE
ATFELPAKAAALRLTVLHRALTGADKFLGRAEVELGPLKEDGGRRHTRWYKLRSKPGKKE
KERGEIEVDIQFMRSNMTASMFDLSMKDKPRSPFGKLKDKLKGKRSSGLSDTASAIVPST
SHSPADSEDEAVEKEKKKSKFKALFSKPGLQKTSLSQSMSVLPTQQPLTPRVRLRPSDFQ
AQWDEEEESQTSPASERSFESVPEQKPAPSPLFKSRKPAFLDSRQLTQGTTNHTKKDGLS
LFSGLKSKNDPVSKSSLCINGSHVYMEETTTKDKTPTSSPSPHNLRRKQLFASEENLSSR
STKPPEETGRTSPGQAFSGSTSLETFKSMTLPSYKLLSSEEHLDTSVPPSTEPVRETKKP
DHKKSALLSLVTGKKEMVKPSEAEIIPDRTLQSEENTIPEEKSEEEAKCPEAPADVGRGS
PSGDAHHAGEAITTKQQPSPCEEEQKPEKAAPAKTKAVKPRLGLSPEEEPKATLPTLAPA
PLPAFLSVHPISSANNPFISEVGQTVQVPDSENITPASLTSPAFAAELWNDKNPFSAEWD
RASRALDPNSITHFPSSHHPAASVPTVPLPGQGSARGNNPFAAGWGQGPEGSEASQGLSD
PHTPSVPSVCPFNDNNPFVSRRGAQAVPAAQAGSSPSCLPAGEDCSSAGPPARGASGGSA
RVALSSDATAVPHPLGTLAGPPGLAPEPRWDSAQLQPGGSLESSKPGPGKCVSFVLGGWQ
GVPAGDAGGEQPLDPSGRLQMSSGAAGEPAGFGGDPSTELSGDSTHPTWSSDGAAVEATG
VSTAFVSLSKCSDSLVAEAEQAQPPRSELREGQEPCGKQCAERVPMSEPQAPPAAGNQPL
PPVQPTPRACRVCPGEGGAGRAGRELLVPPKPAPRVAVLLRKPPGTPQADAPAPGDAANS
TPGLPFPAQGGSLGTVTPAVAPRGVSPQRGQSRPVEKEGGDGLSVCLTNVRSALPVPGDR
GSVLPVIPEGGSDEELLGDCQDSCEAPAGDRGVLGNGEQPRGVTALHGERRELSDSSAAA
PGGGGGGGAIPGACEPGSLAELPGSLAELPGSLAELPAALGAPRVSVQGADSGLAVTSHS
KECDTPSEKQQLERSAGAEERAECDFSEPSAFSSSLSSPCQPHSSSHSLLSDTPSCRAES
PKKPRAEGFADKAGNSGKKKLLQARVSPSETSPNHPPWGETVSPQHRLHPVKPMNAMANK
PQSKNLNVISTMNEKLLEMSVKKYDPSDPAYAYAQLTHDELIQLVLKQKDTITRKDLQVR
ELEDYIDNLLVRVMEETPNILRISMSGNKKAGKM
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccgggctgggcgcccacccacgtgcgggtgacggtgctgcgggcgcggggg
ctgcgcgccaaggcggcggcgggcggcagcgacgcgtacgcggtgatggcgctgggccgc
gacaagttccgcacgtcggtggccgagcgctgccggggcgagccgctgtggcgggaggag
gccacgttcgagctgcccgccaaggccgccgcgctgcgcctcaccgtgctgcaccgcgcc
ctcaccggcgccgacaagttcctgggccgcgccgaggtggagctgggcccgctgaaggag
gacggcggccggcggcacaccaggtggtacaagcttcgctccaaacctgggaagaaggaa
aaggagagaggggagattgaggtggacatccagttcatgaggagcaacatgacagccagc
atgtttgatctgtccatgaaggacaagccccgctctccctttgggaagctcaaagacaaa
ctcaagggcaagaggagcagtggcctctcagacacagcgtcagccatcgtccccagcacc
tcccactcccctgctgacagcgaggatgaggcagtggagaaggagaagaagaaatccaag
ttcaaagcgctgttctccaagcctggcctgcagaagacatcgctgtcccagtccatgtcg
gtgctgcccacccagcagcccctcaccccgagggttcggctgcggcccagcgacttccag
gcgcagtgggatgaggaggaggagtcccagacctctcctgcctcagaacgatcctttgaa
agtgtgccagaacagaagccagctccttctcctctgttcaaatctcgtaaaccagccttt
ttggacagtaggcagctaacccagggaaccactaaccacaccaaaaaggatgggctctcg
ttgttcagtggccttaaatccaaaaacgatcccgtgtccaagtccagtctgtgtatcaat
ggcagtcacgtttatatggaagagaccacgacaaaggacaagactccaacctcctccccc
tctcctcacaacctcaggaggaagcagctctttgcttcagaggagaacctgtcctccagg
tccactaagccacctgaagagacggggagaacctctcctgggcaggcattctctggctcc
acatccttggagactttcaaatccatgactttgccatcgtacaaactgctcagcagtgag
gagcacctggacaccagcgttccaccaagcactgagcctgtcagagagaccaaaaaacca
gaccacaaaaagtctgccttgctctccttggtcactgggaagaaggaaatggtgaagccc
agcgaggctgagattattcctgacaggaccctgcagagtgaggaaaatacaattccagaa
gagaagagtgaagaggaggccaaatgccctgaagccccagcagatgtgggcagagggagc
ccctcaggagatgctcaccatgcaggggaggccatcacaaccaagcagcagcccagccct
tgtgaggaggaacagaaacctgagaaagctgcaccagccaagaccaaagctgtgaaaccc
agactgggcctgtctccagaggaggaacccaaagccacgcttcctactcttgcacctgcc
cccctccctgctttcctgtctgtgcaccctatcagcagtgccaataatccttttatttct
gaagtggggcagacagtccaagtgccagactctgaaaacatcactcctgcctctctcact
tctcctgcttttgctgcagagctctggaatgacaagaacccttttagtgctgagtgggac
agggcatccagagccctggatcccaacagcatcacccatttcccttcatcccatcatcct
gcagcctctgttcccacagtgcctcttcctgggcagggctctgcccggggcaataatcct
tttgctgctggctgggggcagggtcctgagggctctgaggcttcccagggtctctctgac
ccacacacaccttctgtcccctctgtctgtcctttcaatgacaacaatcccttcgtgtcc
aggcgtggggcacaggcagtgccagctgcccaggctggttcttccccttcctgccttcct
gctggggaggattgttcctctgcaggaccccctgctcgtggtgcttcagggggctctgca
cgtgtggctttaagcagtgatgccacagctgtgccacaccctctgggcaccttggctggc
ccccctgggctggctccagagccacgctgggattctgcccagcttcagcctgggggttct
ttggaaagcagcaagccaggccctgggaaatgtgtgtcctttgtccttgggggatggcag
ggtgttccagcaggtgatgcaggtggagagcagcccctggatcccagtgggaggttacag
atgagctcaggagcagcaggagagccagcagggtttgggggtgacccatcgacagagctg
tctggggacagcacacatcccacctggagcagtgatggagcagctgtggaggccactggt
gtgagcactgcttttgtgtccctctccaagtgcagtgacagcctcgtggcagaggctgag
caggcacaaccccccaggagtgagctcagggaggggcaggagccctgtggaaagcagtgt
gcagaacgtgtgcccatgtcagagccccaggcacctccagctgctggaaatcagcccctt
cctccagtccagcccacacccagagcctgcagggtgtgccctggggaagggggtgcaggg
agggctggcagggagctccttgtgcccccaaagccagccccacgagtggctgtgctgctg
aggaaacccccagggaccccccaggctgatgctcctgctccaggggatgctgcaaattcc
accccagggctcccattccctgctcaggggggctccttggggactgtcacccctgcagtg
gcacccaggggtgtcagtccccaaagaggacagagcaggcctgtagaaaaggagggtggt
gatggtttgtctgtctgtctgacaaatgtcaggtctgcccttcctgttcctggggaccgt
ggctcggtgctgcccgtgatccctgagggaggctctgatgaggagctgctgggggactgc
caggacagctgtgaggcccctgcaggtgacagaggtgttctggggaatggagagcagccc
agaggtgtgacagctttgcatggagagcggagagagctctctgatagctctgctgctgct
ccaggaggaggaggaggaggaggagccattcctggtgcttgtgagccagggagcttggct
gagctgccagggagtttggctgagctgccagggagtttggctgagctgcctgctgcactg
ggggctcccagggtctctgtccaaggagctgactcaggtttagctgtgacatctcattcc
aaggagtgtgacactccttctgagaaacaacagctggaaaggagtgcaggtgctgaggag
cgtgcagagtgtgacttctctgagccttctgctttctcttcctccctgtcaagtccttgc
cagccccactcttcctctcactccctcctctctgacaccccgagttgtagagcagagtct
ccgaaaaagccgagagccgagggcttcgcagataaagcgggaaattcgggcaagaagaaa
cttctccaggcacgggtctcaccctctgaaacgtcccctaaccaccccccatggggtgaa
accgtgtctccccagcacagactccatcctgtgaagccaatgaatgccatggcaaacaaa
cctcagagcaagaacctgaatgtcatcagcaccatgaatgaaaagctgctggaaatgagt
gtgaagaaatacgatccctcagaccctgcctatgcctatgctcagctgacacacgatgag
ctgatccagctggtgctcaaacagaaggataccattaccaggaaggacctgcaggtgagg
gagctcgaggattacatcgacaacctgctggtcagagtcatggaggaaaccccaaacatc
ctcagaatctccatgtctggcaacaaaaaagctgggaagatgtga
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