Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456932
Help
Entry
135456932 CDS
T09958
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135456932 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135456932 (LSM1)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
135456932 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
135456932 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
135456932
NCBI-ProteinID:
XP_064587209
LinkDB
All DBs
Position
22:2532029..2533924
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKER
GLSVPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcacggccagcctgatccaggacatcgacaagaaacacctggtg
ctgctgagggacggccggacgctcatcgggtacctgcggagcatcgaccagttcgcgaac
ctggtgttgcaccagactgtggagcgcatccacgtgggcaagaagtacggcgacatccct
cggggcatcttcgtggtgagaggcgagaatgtggtgctgctgggggaaattgacctggag
aaggagagcgacacacctctgcagcaggtgtccatcgaggagatcctggaggagcagcgg
gtggagcagcaggccaagcaggagtcagagaagctgaaggtgcaggctctgaaggagcgg
gggctctcagtgccacgtgctgacacattggatgagtactga
DBGET
integrated database retrieval system
