Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457207
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Entry
135457207 CDS
T09958
Symbol
MATN1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
zle04990
]
135457207 (MATN1)
Domain-containing proteins not elsewhere classified [BR:
zle04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
135457207 (MATN1)
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
cEGF
EGF_CA
Plasmod_Pvs28
EGF_LRP2
ASD2
EGF
Motif
Other DBs
NCBI-GeneID:
135457207
NCBI-ProteinID:
XP_064587696
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All DBs
Position
23:6607766..6629530
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AA seq
493 aa
AA seq
DB search
MARICCALLLSLLLLLHSPAACGAPPQPRGTLCRTKPTDLVFIIDSSRSVRPHEFEKIKV
FVSRVIEALDVGPNATRVGIINYASAVRSELALQGPQSKAALLQAVRRIQPLSTGTMTGL
AIQFAISRAFSAAEGARASAPNFKKVAIVVTDGRPQDGVQDVSARARAAGIEIFAIGVGR
VDMGTLRQMASEPLDEHVDYVESYSVIEKLTHKFQEAFCVVSDLCATGDHDCEQVCVSTP
GAYRCACRDGFSLNSDGKTCTACNGGLGSALDLVFLIDGSKSVRPENFELVKKFINQIVD
SLEVSDKQAQVGLVQYSSSVRQEFPLGQFKSKKDIKAAVKKMSYMEKGTMTGQALKYLVD
SSFSVINGARPGVPKVGIVFTDGRSQDYISDAAKKAKDSGFRMFAVGVGNAVEDELREIA
SEPVAEHYFYTADFRTISKIGKKLQMKICVEEDPCECKSIMKFQTKVEELINSLQQKLEA
VAKRIEALENKII
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggccaggatttgctgtgccctgctgctctcgctgctgctgctcctgcacagcccggcc
gcctgcggggccccgccgcagccccgcggcaccctgtgcaggaccaagcccacggacctg
gtgttcatcatcgacagctctcgcagcgtgcggccacacgagttcgagaagatcaaggtg
ttcgtgtcgcgcgtcatcgaggcgctggacgtgggccccaacgccacccgcgtgggcatc
atcaactacgccagcgccgtgcgcagcgagctggccctgcagggcccccagagcaaggcg
gcgctgctgcaggccgtgcgcaggatccagcccctctccacgggcaccatgaccggcctg
gccatccagtttgccatcagccgcgccttcagcgccgccgagggcgccagggccagcgcg
cccaacttcaaaaaggtggccatcgtggtgacggacgggcggccccaggacggggtgcag
gacgtgtctgcccgggccagggctgcgggcatcgagatcttcgccatcggcgtgggcagg
gtggacatgggcacgctgaggcagatggccagcgagcctctggacgagcacgtggactat
gtggagagctacagcgtcatcgagaagttgacccacaagttccaagaggctttctgtgtg
gtgtctgacctgtgtgccacgggggaccacgactgtgagcaggtgtgtgtcagcacccca
ggggcctacaggtgcgcctgcagggacggcttcagcctcaacagcgacggcaagacctgc
accgcttgcaatggtggcttggggtctgctctggatcttgtgttcctcatcgatggctcc
aagagtgtgaggcctgagaactttgagctggtgaagaaattcatcaaccagatcgtggat
tctctggaggtgtcggacaagcaggcacaggtggggctggtgcagtactccagctccgtc
cggcaggagttccctctgggccagttcaagagcaagaaggacatcaaagcagcagtgaag
aaaatgtcctacatggagaagggcaccatgacaggccaggctctcaagtacctcgttgac
agctccttctccgtcatcaacggagcccggcccggcgtccccaaggtggggattgtcttc
actgatgggcgctcacaggattatatctcagatgctgccaaaaaagccaaggactcagga
tttcggatgtttgccgtgggagtgggcaacgctgtggaggatgagctgagggagatcgcc
tcagaacccgtggctgagcattatttctacactgctgacttcaggaccatcagcaagatc
gggaagaagctgcagatgaagatctgtgttgaggaagatccgtgtgagtgcaaatccatc
atgaagttccagaccaaagtagaagagctcatcaattccttgcagcagaaactggaagct
gtggccaaaagaattgaagccctggagaacaagatcatctaa
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