Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457253
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Entry
135457253 CDS
T09958
Name
(RefSeq) ras-related protein Rab-39B-like
KO
K07925
Ras-related protein Rab-39B
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135457253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135457253
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
zle04031
]
135457253
Membrane trafficking [BR:
zle04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
135457253
GTP-binding proteins [BR:
zle04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
135457253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
AAA_24
Motif
Other DBs
NCBI-GeneID:
135457253
NCBI-ProteinID:
XP_064587774
LinkDB
All DBs
Position
23:7471491..7473002
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AA seq
214 aa
AA seq
DB search
MEPRWQYQFRVIMLGDSTVGKSSLLRRYTEGAFLDTVNQTVGVDFYVQFVELEPGLQVKL
QFWDTAGQERFRSVTRSYYRNSAGGMLLFDITNRTSFESIRQWHQEVTDTIQPFRMVFLL
VGHKSDLAGQRRVGQREAEKLAASLGVQYVETSAKDASNVVQAFQMLTVAIYQALQTGQL
VATEAWDGVKSSIPLPVLPKAQAQEKEKWKRCSC
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggagccacggtggcagtaccagttccgagtaatcatgctgggggactcgacagtgggg
aaatcctcactgctgcggcgctacaccgaaggtgccttcctggacactgtcaaccagaca
gtgggggtggacttctacgtccaattcgtggagctggagccagggctgcaagtgaagctg
cagttctgggacacagccgggcaggagaggttcaggtctgtgactcgctcctactaccgc
aactcagccggggggatgctgcttttcgacatcaccaaccgcacatcctttgagagcatc
cggcaatggcaccaggaggtgactgacaccatccaacccttccgcatggtcttcctgctg
gtggggcacaagagtgacctggctgggcagcgccgggtgggccagagggaggcggagaag
ttggcagcctcactgggtgtccagtatgtggagacctcagccaaagatgcttccaatgta
gtccaggcctttcagatgctgacagttgccatttaccaagcgctgcagacggggcagttg
gtggccactgaggcgtgggacggggtgaagagcagcatcccactgccagtgctgcccaag
gctcaggcacaggagaaggagaagtggaagagatgctcgtgctag
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