KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457290
Entry
135457290         CDS       T09958                                 
Symbol
TAF12
Name
(RefSeq) transcription initiation factor TFIID subunit 12
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    135457290 (TAF12)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zle03021]
    135457290 (TAF12)
   03036 Chromosome and associated proteins [BR:zle03036]
    135457290 (TAF12)
Transcription machinery [BR:zle03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     135457290 (TAF12)
   Coactivators
    SAGA/TFTC/STAGA complex
     135457290 (TAF12)
Chromosome and associated proteins [BR:zle03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     135457290 (TAF12)
    STAGA complex
     135457290 (TAF12)
    TFTC complex
     135457290 (TAF12)
    SAGA complex
     135457290 (TAF12)
    SLIK complex
     135457290 (TAF12)
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa CENP-T_C TAF4 TAF10 DUF5827
Other DBs
NCBI-GeneID: 135457290
NCBI-ProteinID: XP_064587865
LinkDB
Position
23:complement(7474363..7480998)
AA seq 161 aa
MNQFGPSALINLSNFSSIKPEPASTPPQSSMANSTTVAKMPGAPSGGGRLSPESNQVLTK
KKLQDLVREVDPNEQLDEDVEEMLLQIADDFIESVVTAACQLARHRKSNTLEVKDVQLHL
ERQWNMWIPGFGSEEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 486 nt   +upstreamnt  +downstreamnt
atgaaccagtttggcccttctgccttgatcaacctctccaacttctcctcgatcaagcca
gaaccagccagcacccccccccagagctccatggccaacagcactaccgtggcaaagatg
ccaggagcacccagtggaggagggcggctcagtcctgaaagcaaccaggttttaaccaag
aagaaattgcaagacctggtgcgtgaggtggatccgaacgagcagctggatgaagatgtg
gaagaaatgctgctacagatcgctgacgacttcattgagagtgtggtgacagccgcctgc
cagcttgcacggcaccgcaagtccaacactctggaagtcaaagatgtccagttgcacctt
gagcgccagtggaacatgtggatcccgggctttggttctgaagaaatcaggccctacaaa
aaagcctgcactacagaagctcacaaacagagaatggcactgatccgcaaaactaccaag
aaatag

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