Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457316
Help
Entry
135457316 CDS
T09958
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zle01009
]
135457316 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zle03021
]
135457316 (SFPQ)
03041 Spliceosome [BR:
zle03041
]
135457316 (SFPQ)
Protein phosphatases and associated proteins [BR:
zle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135457316 (SFPQ)
Transcription machinery [BR:
zle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135457316 (SFPQ)
Spliceosome [BR:
zle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
135457316 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
135457316
NCBI-ProteinID:
XP_064587903
LinkDB
All DBs
Position
23:complement(3083367..3097317)
Genome browser
AA seq
603 aa
AA seq
DB search
MSRDRFRSRGGGGGGFHRRGGGGGRGGPNHDFRSPPPGMGMGQNRGPMAGGPQGPGGPPG
GGPKPEPPKPPTSTSAPPSSSSSASATTAGPTGSQAGAPPSSALPAGQQPQQQPPVSAPS
ASPAGAQPQSKPSPSPTPAGGPKKGQGQSPGGGPKGPGGPQQGPHKGGPGHRGGPGGEPR
GRGQQHQGQQSLGSQQGSGDRSEKLSDEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADI
TDEDFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGRQLRVRFAT
HAAALSVRNLSPYVSNELLEEAFSQFGPVERAVVIVDDRGRSTGKGIVEFASKPAARKAF
ERCTEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRFAQPGSFEF
EYSQRWKSLDEMEKQQREQVAKNMKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRR
MEELHNQEMQKRKEIQLRQEEERRRREEEMMIRQREMEEQMRRQREENYSRMGYMDPRER
DMRMGGAATMNMGDPYASAAQKFPPLGGGGGIGYEANPGVGQAAMSGSMMGSDMVTYPVV
ALA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgggatcggttccgtagccgtggcggcggtggcggcggctttcaccggcgtggc
ggcggtggaggacgcggcggtcccaaccacgatttccgctcgccgccgcccggcatgggc
atgggacagaaccgcggcccgatggcgggcggcccgcaaggcccaggaggtccgccggga
ggaggcccgaagcccgaaccgccgaagccgcccacgtccacctctgctccgccttcttca
tcctcctcagcctccgccaccacggcgggacccaccggcagccaggcgggagcgcctcca
tcctctgcgcttcccgcggggcagcagccacagcagcagccgccagtttcggctccttcc
gcgtctcctgccggcgcacagccacaatccaagcccagccccagccccacaccggccggc
ggccctaagaaaggacaaggacagtctcccggcggcggccccaaggggccgggcggcccg
cagcaggggccgcacaagggcggcccggggcaccgcggcgggccgggcggggagccgcgg
ggccgcgggcagcagcaccagggccagcagagcctcgggtcacagcagggctcgggagat
aggagcgagaagctgtcggacgagggctttaaagcgaatctttctctgctgaggcggccc
ggggagaagacttacacacagcgctgccggttgtttgttgggaatttgcccgctgatatc
acagatgaagactttaaaagactgtttgccaaatacggggagccgggagaggtttttatc
aacaagggcaaaggctttggattcattaaattggaatctcgagctcttgcagaaatcgca
aaggcagagttggacgatacccccatgaggggccggcagctccgcgttcgctttgccact
cacgccgctgccctgtcggttcggaacctctcgccctacgtgtccaacgagttgctcgag
gaagctttttcccagttcggtccggtggaaagagctgttgtgattgtagatgatcgaggt
agatcaacaggaaaaggcattgttgagtttgcatcaaagccagctgcaaggaaagcattt
gaacggtgtactgagggcgtgtttttgttgacgaccactcccaggccagttattgtggaa
cccttggaacagctggatgatgaagatggtcttccagaaaagcttgctcagaagaatccg
atgtatcaaaaggaaagagagactcctccccgttttgctcagcctggcagttttgaattt
gaatattctcaaaggtggaaatctttagatgaaatggaaaagcagcagagagagcaagtg
gcaaaaaacatgaaagatgccaaggacaaacttgaaagtgagatggaagatgcttatcat
gagcatcaggcaaacctcctgcgtcaagacctcatgaggcgccaggaggagctgaggcgg
atggaagaacttcataatcaggaaatgcagaaacgcaaggaaattcaactgaggcaggag
gaggagcgccgccggcgggaggaggagatgatgatccgtcagcgggagatggaagagcag
atgagaagacagagggaagagaattatagtagaatgggttacatggatccaagggagcga
gacatgagaatgggtggtgctgccacaatgaacatgggagatccttatgcttcagcagcc
cagaaatttccacctctgggaggtggtggcggcataggttatgaagctaatccaggagtt
ggccaagcagccatgagtggttctatgatgggaagtgacatggtaacgtatcctgtggtg
gctttagcttag
DBGET
integrated database retrieval system
