Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457365
Help
Entry
135457365 CDS
T09958
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04270
Vascular smooth muscle contraction
zle04625
C-type lectin receptor signaling pathway
zle04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135457365 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
135457365 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
135457365 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135457365 (ARHGEF12)
Membrane trafficking [BR:
zle04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
135457365 (ARHGEF12)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Protamine-3
Motif
Other DBs
NCBI-GeneID:
135457365
NCBI-ProteinID:
XP_064587956
LinkDB
All DBs
Position
24:2478145..2584192
Genome browser
AA seq
1529 aa
AA seq
DB search
MSGTQSTITDRFPLKKPSRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSDVDLAAFGHMSPIMASPHSP
GTSGNAERITSPVLMGEENNIVHNQKVEILRKMLQKEQERLQDLQEEYSRTPSTRLLKEI
QEAKKHIPQLQEQLSKATGCTQDGVLSSRSVSESLQISEGEAESGDSGSKLDFSGDSPSR
PNSDIADSPRSGLKERIYPDESPEKAELQDTDSQCSVGSPLSRVGTQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPEEISLELDRRRPELLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELSRLDAERLRDRNAVERERSCAEQILAKIEEVLMTSQPLEEDKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEMQKPRHPKHSPTAACVSPEPPEGSKGRQSGSSSDGTDGPYPP
ANPMSPLATGPFASPEGSKDSDTGVKQPGEAPPASESMDGTPRTPNNTFEFPSPLENLQE
EEGEAERMVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILSSSDKRKIFSNLEDILGLHV
ALNDQMKSVRKRNETSVIGQIGEDLLSWFSGAAEEKLKLATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKRA
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSATGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSSRRVI
PLPQSGPGEEEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLILNPQSSSPILSEKAK
VEGLLEGQFEKGPQAELALKDSSGCSSASVPEGQWARDALRNLGLLKQLLVQQLGLAEKG
TLEDRQRLPRFRSASQTESGPEQQQTANAERESQQAAEDRALGRTGEEERHSARTAAQGP
ASGDALQLLGTEPPARAALPMDSTELEGSSSELEGLGADESGEHFFDAREAHGDENPGEG
GELLDRKEEEEDEEEEEEEVQIRISGNYLILDGYGAVQESSTDEEVSALVLQCTAHRQPG
CPQQEPREPRRARASSPLAEELRWAGLEEPCPFPGSPQLPLQSRVQLLQYIHNIQDALEK
LKEVEEDYSVLRRQGLAGSASSGEHSDKS
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaaccttcgagacac
ggcagcattctgagcagagagtctccagcagacaagaagcagaaggttgaacgctgcagc
agcacccacgacttcgaccccacagatagctcctccaagaagacaaagtctagttctgag
gagagtagatccgagacgtatggcctggtgcagaggtgtgtggtgatccagcgggatgag
aacggcttcgggctgacggtcagcggggacaaccccgtcttcgtgcagtctgtcaaggaa
gatggagcagccatgcgggctggagtgcagacaggtgatagaattatcaaggtgaacggg
actctggtaacgcactcgaaccatttggaggtggtcaagctgatcaagtcgggctcctat
gtagctctcactgtccaggggcgccctccagggtcgccccagatccccctggcggattct
gacgtggacctggcagcttttgggcatatgtctcccatcatggcatccccgcactcgcct
ggcacgtcagggaatgcagagaggatcaccagcccggtgctcatgggggaggagaataac
attgtccacaaccagaaggtggagattctgaggaagatgctccagaaggagcaggagagg
ctgcaggacctgcaggaggagtacagccggaccccttccacccgcctgctgaaggagatc
caggaggccaagaaacacattcctcagctgcaggagcagctctccaaggccacgggctgc
acccaggatggagtcctgtcctccaggtctgtgtcagagtcgctgcagatcagcgagggc
gaggcagagagtggggacagcggcagcaaactggacttcagtggtgacagcccctccaga
cccaacagtgacattgctgatagccctcgcagtggcctgaaggagaggatttacccagat
gagagcccagaaaaggctgagcttcaagacactgactcgcagtgcagtgttggcagtccc
ctgtcccgggtggggactcagatcatcggagcagaggatgatgattttgacacggagcag
gagcagatcaatgggcagtgcagctgcttccagaacatcgagctgctgaaatcgcgcccg
gcccacctggccgtgctgctgcaccacgtggtgtcccagttcgatcctgcagcgctgctg
tgctacctttacacagacctgtacaaacagaccaactccaaagagactcgccgtgttttc
ctggagttttaccagtttttcctggacagagctgcaaacctgaaagtcccagttccagag
gaaatctccttggaattagacaggagaaggccggagctcctccctgaggagctgcaccgc
cagttcatccagaccatgcaggataaagtctgcccagaggttcagaggaacctggaagat
ttcaggcagaagaggagcatggggctgaccctggccgagggggagctgagcaggctggac
gcagagcggctccgcgaccgcaacgccgtggagagggagaggagctgtgccgagcagatc
ctggccaaaatcgaggaggtcctgatgacatctcagcctctggaggaagacaagagctcc
acgatgcaatatgtgatcctcacctacatgaaacacctgggagtgaaagtgaaagagcct
cggaacctggagcagaaacggggcaggattgggttcctgccaaagatcaagcaaagcatc
aagaaagagaaagaaggagaggagaaagggaagaggagaggcttccccaacatcctgggg
ccgccaaggcgaccgagcagacacgacagcagtgccattggcagggccatggagatgcag
aagcccaggcaccccaagcactcgcccacagcggcctgtgtgagcccggagccccccgag
ggcagcaaggggcggcagagcggctcctccagcgacggcaccgacggcccctacccccct
gccaaccccatgtcccccctggccacggggccctttgcctccccagagggcagcaaggac
agtgacacaggtgtgaagcagcctggggaagccccacctgccagcgagtccatggatggc
accccccgcactcccaacaacacctttgagttcccatctcctctggaaaacctgcaggag
gaggagggagaggctgagaggatggttgacatgggaacaccgaagccttttcgcaagatg
gacagcgttggctttgcagatgtgcagagtgaggacgagctctatgacttcgacatggac
atggaccctcccaactggcagcagctcgtgagcagggaggtgctgatggggctcaaaccc
tacgaaatcaaacgtcaggaagtgataaatgagctgttctacacggagcgagcccacgtg
cgcacgctgaaggtcctgcacaacgtcttctaccagagggtcaccagggagggcatcctc
agctccagtgacaagaggaaaatcttctccaacctcgaggacatccttgggctgcacgtt
gcactgaacgatcagatgaaatctgtccgaaaaagaaacgagacttctgtcattggccaa
attggggaagatttgctctcctggtttagtggagcagcagaggagaagctgaaacttgcc
actgccaccttctgcagcaaccagcccttcgctctggaggtcatcaagtcccgccagaag
aaggactcgcgcttccagaccttcgtgcaggatgctgagagcaatcccctgtgccggcgg
ctgcagctcaaggatatcatccccacggagatgcagaggttgacgaaatacccccttctg
ctggataacattgctaaatacacagagctgcctgaggagaaggagaaagtcaagagagca
gcagatcactgtcgccagatcctcaaccacgtgaaccaggctgtcaaggagtcagagaac
aaacagcacctggaggattatcagcggagactcgacctctcctacttgaagcagtccgag
gatcccatgatggatgagttcaggaacctggatctaacaaagagaaaaatgctccatgaa
gggcccttgacctggaaggtgaatcgtgacaaaaccatcgatctgtacactctgctgctg
gaggacatcctggtgctgctgcagaaacaagatgacaagctggtgctgaagtgccacagc
aagatcctggcatccacagccgacagcaagcacaccttcagccccatcatcaaactcaac
accgtgctggttcgccaggtggccacagataacaaagctttcttcgtcatctccatgtcg
gcgacgggggctcacatctacgagctggtggcacagactgtctccgagaagaatgtctgg
caggaccttatagctcagatggcaggaactgtgaagatggggagcagcaggagagtgatc
ccactgcctcagtcaggccctggcgaagaggagcgtgaggaagaggagcagcagaagctg
aaggagcagcatgacattcctgccagcagcctgcagagcccagataaagatctgggcctg
gagtctccgttgatactgaaccctcagtcctcgtcgcccatcctgtctgagaaggccaag
gtggaggggctgctggaggggcagtttgagaaggggccgcaggcagagctggccctcaag
gactcctctggctgcagctcagcctcggtgccagaggggcagtgggcccgggatgccctg
aggaacttggggctgctgaagcagctcttggtgcagcagctgggcctggctgagaagggg
accctggaggacagacagcgcctgcccaggttcaggagcgcgtcccagacagagagcggc
cccgagcagcagcaaactgcaaacgctgagagggaatcccagcaggctgcagaggacaga
gccctgggcaggactggcgaggaggagaggcacagtgcccggactgcagcgcagggcccg
gcctcgggggatgccctgcagctgctgggcaccgagccccctgcccgggccgccctgccc
atggacagcacggagctggagggctccagctcggagctggaggggctgggggctgacgag
agcggggagcatttcttcgatgctcgggaagcgcacggcgatgagaaccccggcgagggc
ggcgagctgctggacaggaaggaggaggaggaggatgaggaagaggaggaggaggaggtg
caaattcggatctcaggaaattatttgatcctcgatggatacggggcggtgcaggagagc
tccacggacgaggaggtgtcggcgctggtgctgcagtgcaccgcgcaccggcagcccggc
tgtccccagcaggagcccagggagccccgcagggccagggccagctcgcccttggccgag
gagctgcgctgggccggcctggaggagccctgtcccttcccgggcagcccccagctcccc
ctgcagagccgcgtgcagctcctgcagtacatccacaacatccaggacgccctggagaag
ctcaaggaggtggaggaggattacagcgttctgcggcgccaggggctggctggctcagcc
tcctcaggagagcactcagacaaaagctag
DBGET
integrated database retrieval system
