Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457510
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Entry
135457510 CDS
T09958
Symbol
CADM1
Name
(RefSeq) cell adhesion molecule 1 isoform X1
KO
K06781
cell adhesion molecule 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135457510 (CADM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135457510 (CADM1)
Cell adhesion molecules [BR:
zle04515
]
Immunoglobulin superfamily
Nectin family
135457510 (CADM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
I-set
ig
V-set
C2-set_2
Ig_5
Izumo-Ig
Adeno_E3_CR1
Motif
Other DBs
NCBI-GeneID:
135457510
NCBI-ProteinID:
XP_064588214
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Position
24:complement(451194..584208)
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AA seq
489 aa
AA seq
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MAGRAQPSGPAGSGGGAPGLLPLLLLLLSAAAIIPRGHGQNLVTEDVTVVEGDVATISCR
VKNSDDSVIQLLNPNRQTIYFRDFRPLKDSRFQLVNFSNSELRVSLTNVSISDEGRYFCQ
LYTDPPQEIYTTITVLVPPRNLVIDIEKETAVEGEEIELNCTAMASRPATTIRWFKGNKE
LTGKSEVERWSDMYTVTSQLLLKVGREDDGVPVICLVDHPAVKDLQTQRYLEVMYKPQVR
VSQNYPLQGLTREGEPLELTCTAFGKPQPTDMRWLRVDDEMPQHVVVSGSNLLISNLNKT
DNGTYRCEASNAVGKSHADYMLFVYDPPTTIPPPTTTTTTTTTIPTTITDTTATTEPAVH
GFTQLPNSAEELDYGDLSGTSVPPTASAEALPTEQLNNASLAFRPSDSRAGEDGAIRSVD
HAVVGGVVAVVVFAMLCLLIILGRYFARHKGTYFTHEAKGADDAADADTAIINAEGGQNN
SEEKKEYFI
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcgcgcccagcccagcggccccgcgggcagcggcggcggcgctccggggctc
ctcccgctgctgctgctgctcctgtccgccgccgccatcatcccccgaggtcacggtcag
aacctggtgacggaggatgtgaccgtggtggagggagacgtggccaccatcagctgccgc
gtcaagaacagcgacgactccgtgatccagctcctgaaccccaacaggcagaccatctac
ttcagagatttcaggcccctgaaggacagcaggttccagctggtgaacttctccaacagc
gagctgcgggtgtcgctgaccaacgtgtccatctcagacgaggggaggtacttctgccag
ctctacaccgacccgccgcaggagatctacaccaccatcacggtgctggtgccaccgcgc
aatttggtaattgatatcgagaaagaaacggccgtggagggagaggagatcgagctgaac
tgcactgccatggccagcagaccagccaccaccatcagatggttcaaaggcaacaaggag
ctaacgggcaagtcggaggtggagcggtggtcggacatgtacacggtgaccagccagctc
ctgctgaaggtggggcgcgaggacgacggcgtgcccgtcatctgcctggtggatcaccct
gccgtcaaggacctgcagacacagcgttacctggaagtcatgtataagcctcaagtgcgg
gtgtctcagaattaccccttgcaaggcctgacgagagagggggagccgctggagctgacg
tgcaccgcctttggaaagccacagcctacggacatgaggtggttaagagtagatgatgag
atgcctcaacacgttgtagtgtctggttcaaaccttctcattagtaacctaaacaaaaca
gataatggtacataccgctgtgaggcttccaacgcggtggggaaatcacatgcggattac
atgctgtttgtatacgatccccccacaactatccctcctcccacaacaaccaccaccact
accaccaccatccctaccaccatcacagacacaacggcgacgacagaaccagcagttcac
ggctttactcagttgcccaattcggccgaggagctggactatggggatctctcaggtaca
tctgtcccacccacagcttcagccgaggctctgccgactgagcaattaaataatgcatcc
cttgccttccgcccttcagattcccgcgcaggtgaggacggcgccatacgcagcgtggac
catgccgtggttggtggcgtcgtggccgtcgtcgtctttgcaatgctttgcctgctcatc
attttagggcgatattttgccagacataaaggtacatacttcactcacgaagccaaagga
gcagatgatgcggccgacgcagacacagccatcatcaacgcagaggggggacaaaacaac
tccgaggaaaagaaagagtacttcatctag
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