Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457511
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Entry
135457511 CDS
T09958
Symbol
CRTAM
Name
(RefSeq) LOW QUALITY PROTEIN: cytotoxic and regulatory T-cell molecule
KO
K16361
cytotoxic and regulatory T-cell molecule
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135457511 (CRTAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135457511 (CRTAM)
04090 CD molecules [BR:
zle04090
]
135457511 (CRTAM)
Cell adhesion molecules [BR:
zle04515
]
Immunoglobulin superfamily
Nectin family
135457511 (CRTAM)
CD molecules [BR:
zle04090
]
Proteins
135457511 (CRTAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
I-set
C2-set_3
C2-set_2
Ig_2
BiPBP_C
Mid2
Neur_chan_memb
Piezo_TM1-24
PFF1_TM
SIT
Anthrone_oxy
US29
Motif
Other DBs
NCBI-GeneID:
135457511
NCBI-ProteinID:
XP_064588223
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All DBs
Position
24:3464009..3492070
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AA seq
555 aa
AA seq
DB search
MSVPGALLAVPLLLLQGAFAGAAGDAVALKEGENLDLNCTFSTLSNHNFTLQWLNPRNFT
IFLNAQQVLRDRRYKLLRFSRAELSIRLSNLTLQDEGIYRCLRYTRLVTTQSHNIHILVP
PSQPVLEISQDEERGIKLSCRTHGARPQPQISWLLDNGIELPGDTRHQLGADGSRWSSRS
SLRLLSYSPAGTATCAIRHPALGTRALLASLSFRNLPRAGCKQATRPSEDAGVPSSSENP
AVPSSPENPAGTNPSASPKEPGVSSPSASPKDPGVSSPSASPENPEFSIPSASPKDPELS
NPSASPENPELSSPSASPNHPELSSPSASPENPELSSPSASPKDPEVSIPSASPGIAAVP
AQPNLTDVSLLGEFGLSQTXISPTXNGNDRGAAGHSVPSHIPQRSHLPAQTSVTEQNPES
KGLLRKEKNLLLPVLVAALLLVLLIIVLLFMVKLKKAHGAWKRENDVSEQTLESYKSRSN
EESPGHEKNGQAGNPKSNMQYITEEHVETPEKNLETPEKNLETPEKNPERPEKNPGDKST
AINEEIFTCGRETDV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcccggggcgctgctggccgtgccgctgctcctgctgcaaggggcgtttgca
ggggctgccggtgacgctgtggctctgaaggaaggagaaaatctcgacctgaactgcacc
ttcagcaccctcagcaaccacaacttcaccctgcagtggctgaacccgcggaatttcacc
attttcctcaacgcccagcaggttctgagggaccggaggtacaaactgctgcgcttctcc
agggctgaactgtccatccggctctccaacctgactctgcaggacgagggcatttaccgc
tgcctgcgctacacccggctcgtcacaacccagagccacaacattcacattttggttcct
ccttcccagccagtgctggaaatctcccaggatgaggaaaggggcatcaaactctcctgt
cggactcacggggccagaccccagccccaaatttcctggctcttggacaacgggattgag
ctcccaggcgacaccaggcaccagctgggggccgacgggagccgatggagcagccggagc
tccctgaggctcctgagctacagccccgcagggacggccacctgtgccatccggcaccct
gcgctgggcacacgggccctgctggcatccctgtccttccggaaccttcccagggcaggc
tgcaaacaggcaacccgaccttcagaggatgcaggagttcccagctcatcagagaatcca
gcagttcccagttctccagagaatccagcaggtaccaacccatctgcatccccaaaagaa
ccaggagtttccagcccttctgcatccccaaaagatccaggagtttccagcccttctgca
tccccagagaacccagaattttccatcccttctgcatctccaaaagatccagaactttcc
aatccttctgcatccccagagaatccagaactctccagtccttctgcatctccaaatcat
ccagaactttccagcccttctgcatccccagagaatccagaactttccagcccttctgca
tccccaaaagatccagaagtttccatcccctccgcatccccagggattgcagcagttccg
gcccagccaaacctcacggatgtctcgctgctcggtgagtttggtctcagccaaacctga
atttctccaacctgaaatggcaatgacagaggtgctgccgggcacagcgttccatcccac
atcccacagcggtcacatttaccagcacaaacctccgttacagagcaaaatcccgaatcc
aaggggctcctgaggaaggagaagaatctcctgctgcccgtgctggtggctgctctgctc
ctggtgctgctcatcatcgtgctgctcttcatggtgaagctgaagaaagcgcacggggcg
tggaagagagaaaatgatgtttcagagcaaacactggagagttataaatccagatctaac
gaagagagtccaggccatgagaagaacggacaagctggaaatcccaaatccaacatgcaa
tatataacagaagaacatgtggaaaccccagagaagaatctggaaaccccagagaagaac
ctggaaaccccagagaaaaatccagaaaggccagagaagaacccaggtgacaaaagcacg
gcaataaatgaggaaatattcacgtgcggaagggagacagacgtgtaa
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