Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457532
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Entry
135457532 CDS
T09958
Symbol
DCPS
Name
(RefSeq) m7GpppX diphosphatase
KO
K12584
m7GpppX diphosphatase [EC:
3.6.1.59
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
135457532 (DCPS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135457532 (DCPS)
Enzymes [BR:
zle01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.59 5'-(N7-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase
135457532 (DCPS)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
135457532 (DCPS)
3'-5' decay
Other 3'-5' decay factors
135457532 (DCPS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
DcpS
DUF2145
Motif
Other DBs
NCBI-GeneID:
135457532
NCBI-ProteinID:
XP_064588267
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All DBs
Position
24:6297793..6317781
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AA seq
324 aa
AA seq
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MAEGPQPKRKREEEEEKNGGTATQGGTAAAFTLSDLRVRRILRESARDKIVFLHAERIGL
SGEGTDAVVILEKTPFQEEKIPDLLKKPMHAELQVHNDIYCTFYLSPPPELSEIKATVVY
PATEKHIQKYLRQEVHLIRETWEDYKNITLPFIQAQSFSIQWVYNILEKKAEADRIVHEN
PDPSNGFVLVPDLKWNQNQLDDLYLIALVHRRDIKSLRDLTAEHLPLLRNVLQEGKEAIV
KRFGVPGSQLRIYLHYQPSYYHLHVHFTALGYDAPGSSVERAHLLADVIDNLAMDSMYYQ
KRALTFPLRADEPLFKKFQEAGKV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggcccgcagccgaagaggaagcgggaggaggaggaggagaaaaatggcggg
accgccactcaaggcggcaccgccgctgctttcacgctgtcggacctgcgggtgcggcgc
atcctgcgggagtcggcgcgggacaagatcgtgttcctgcacgccgagaggattggcctc
tctggagagggcacggatgctgtagtcatcctggaaaagactcctttccaggaggagaag
atcccagacctgctgaagaagcccatgcacgcagagctgcaggtgcacaatgacatttac
tgcaccttctacctgagccctcccccagagctgagtgagatcaaagccacagtggtgtac
cctgccacggagaaacacatccagaaatatctccggcaggaagtgcacctcatccgtgag
acctgggaggattacaagaacatcaccctgcccttcatccaggcccagagcttcagcatc
cagtgggtgtataatatcctggagaagaaagctgaggctgatcgaatcgtccatgaaaac
ccagatccttccaatggctttgttctggttccagatttaaagtggaatcaaaaccagctg
gatgatctgtacctgatcgccctcgtgcaccgccgcgacatcaaatccctgcgggacctc
acggccgagcacctcccgctgctgaggaacgtcctgcaggaagggaaggaggccatagtg
aagcgcttcggcgtgcccggctcccagctgcgcatctacctgcactaccagccctcctac
taccacctgcacgtgcatttcactgccctgggctacgatgcaccaggcagctccgtggag
agagcccatctcctggctgatgtcattgacaacctggccatggactccatgtactaccag
aaacgggctctgaccttccccctgcgggctgatgaacccctgtttaagaagttccaggag
gcaggaaaagtgtga
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