Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457543
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Entry
135457543 CDS
T09958
Symbol
VPS11
Name
(RefSeq) vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04140
Autophagy - animal
zle04148
Efferocytosis
zle05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135457543 (VPS11)
04148 Efferocytosis
135457543 (VPS11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135457543 (VPS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135457543 (VPS11)
Membrane trafficking [BR:
zle04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135457543 (VPS11)
Hops complex
135457543 (VPS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PEP5_VPS11_N
TPR_PEP5_VPS11
VPS11_N
VPS11_C
Clathrin
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-rbx1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_1st
zf-C3H2C3
zf-RING_5
TPR_GEMI5
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf_RING_Vps8_fungal
Beta-prop_EML_2
zf-RING-like
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
135457543
NCBI-ProteinID:
XP_064588298
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All DBs
Position
24:complement(50288..60499)
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AA seq
929 aa
AA seq
DB search
MAAYLQWRRFVFFDRETVREPSGPDGAGAKPFALPPGIAVCDSGRGSLVFGDMEGQIWFL
PRSLQLSSFQAYKLRVTHLYQLKQHSILVSIGEDEEGINPLVKVWNLEKRDGGNPLCTRI
FPAIPGNKPTVVSCLTVHENLNFMAIGFADGSVVLTKGDITRDRHSKTQILHEGSYPITG
LAFRQSGKTTHLFVVTTENIQSYMLSVKDYPHLELDTHGCGLRCSSLSDPSQDLQFIVAG
NECVYLYQPDERGPCFAFEGQKLIVHWYRGYLIIVSKDRKTSPKSEFAENEAQNSDKQVL
NIYDLCNKFIAYSSIFDDIVDVLAEWGSLYVLTRDGKIHVLQEKDTQTKLEMLFRKNLFE
MAINLAKSHHLDSDGLSEIFRQYGDHLYNKGNHDGAIQQYIRTIGKLEPSYVIRKFLDAQ
RIHNLTAYLQMLHLQSLANADHTTLLLNCYTKLKDSSKLEEFIKTSESEVHFDVETAIKV
LRQAGYYSHAVYLAEKHEHHEWYLKIQLEDIKNYQEALHYIGKLPFEQAESNMKRYGKIL
MHHVPKETTELLKILCTDYRPSGGNEGPGMLEGKKANSEEFIPVFANNSRELKAFLEHMT
EVQADSPQGVYDTLLELRLQNWAHEQDEQIKEKLHNEALTLLKSGRFKTVFDKALVLCQM
HNFKDGVLYLYEQGKLFQQIMHYHMQNEQYKKVIEVCELYGDQEACLWEQALSYFARKEE
NCKEYIAAVLKHIENKNLMPPLLVVQTLAHNSTATLSVIKDYLVNKLQKQSRQIEQDEQR
IQKYREETMRIRLEIEELKASPKIFQKTKCSICTSALELPSVHFLCGHSFHQHCFESYSE
SDSECPTCMPENRKVMDMIRAQEQKRDLHDQFQHQLKCSNDGFSVVADYFGRGVFNKLTL
ITDLPSGKTATTIEAGLQRELLIHTKRST
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctacctgcagtggcgccggttcgtcttttttgacagagagacggtgagggag
ccctcggggccggatggagccggtgcgaagcctttcgcgttgcccccgggcatcgcggtc
tgcgactcgggccggggaagcctcgtgttcggagatatggaaggtcagatttggtttttg
cctcgctcccttcaactcagcagtttccaagcttacaagctaagggtgacacatctgtac
cagctgaagcagcacagtatcctggtttctattggtgaggatgaggagggtataaatcct
ttggtgaaagtctggaatctggagaaacgagatggtggtaaccctctttgcacacgaatt
tttccagcaataccaggtaacaagcccacggttgtatcctgcctgactgtccacgagaat
cttaatttcatggctatcggttttgcagatgggagtgttgtacttactaaaggagacatc
acccgagatcggcatagtaagacccagatcctacatgaaggcagttaccccattaccggc
ctcgcttttcgacagtctggcaaaacaacacatctatttgtggtgaccacagagaacatc
cagtcttatatgctttcagtgaaagactatcctcacctggagctggacactcatggttgt
ggattgcgctgttcatctctcagtgacccctcccaggatctccagttcattgtggcagga
aatgaatgtgtgtacctttaccaaccagacgaacgtggcccctgctttgccttcgaggga
caaaagctgattgttcactggtatcgggggtacctcatcattgtctccaaggaccgaaag
acttccccaaagtcagaatttgctgagaacgaggcacagaattcagacaaacaagtcctg
aatatctatgacttgtgcaacaaattcattgcatacagctcaatctttgatgacatagtg
gatgtcttggcagagtggggatctctctatgtactgaccagagatgggaagatccatgta
ctgcaggagaaggatacacaaaccaaactcgagatgctgttcagaaagaacttatttgaa
atggccattaacctggccaagagccaccacttggacagcgatggtttgtcagagattttc
cgtcagtatggtgatcatctctataacaagggaaaccatgatggagccattcagcagtat
attcgaactatagggaagctagaaccatcttatgttattcggaaattcctggatgctcag
cgtatccacaaccttactgcttatctacagatgctccatctgcagtccctggccaatgca
gaccacactacacttctgctgaattgctataccaaactcaaagacagctccaaactggaa
gagttcattaagacgagtgagagtgaggtccactttgatgtggaaacggctatcaaggta
cttcgccaagctggctactactcccatgccgtgtacctggcagagaagcatgagcatcat
gaatggtacctcaaaatccagttagaggacatcaagaactaccaagaggctttgcactac
attggaaaactgccctttgaacaggcagagagtaacatgaagcgatatggtaaaatcctg
atgcaccatgttcctaaggagaccactgaattgctgaagatcctttgcactgattaccgt
ccctcgggaggtaatgaaggccctgggatgctagaaggaaaaaaggctaattcagaggag
ttcatcccagtctttgcaaacaattcccgagaactgaaagcttttctggagcacatgact
gaggtgcaggctgactctccacagggtgtctatgacactttactggaacttcgactgcag
aactgggcacatgagcaagatgagcagatcaaggagaagttgcacaatgaagccctcacc
ctcctgaagagcggaaggttcaaaacagtctttgataaggccttggtcttatgtcagatg
cacaatttcaaggatggtgttctctacctctatgaacagggcaaacttttccaacagatc
atgcactaccacatgcagaatgagcagtacaagaaggtgattgaggtgtgtgagttgtat
ggcgaccaagaggcttgtctctgggaacaggctcttagctactttgcacggaaggaggag
aactgcaaagagtatattgctgcagtgctgaaacacatagagaacaagaatcttatgcct
ccgctgcttgttgtgcagacgctggctcataactccacagccaccctgtctgtgattaag
gattatcttgtcaacaagctgcagaagcaaagccgccagatagagcaggatgagcagaga
attcagaaataccgagaagaaactatgaggatccgtctggaaattgaagagctaaaagca
agtcccaagatttttcagaagaccaagtgtagcatttgcaccagtgcattggagctccct
tcagtccacttcctctgcggtcattcctttcaccagcactgctttgaaagctactctgag
agtgattcagaatgtcctacttgcatgccagaaaatcgcaaagtgatggacatgatccga
gcccaggagcagaagagagatctgcatgaccagtttcagcatcagctcaagtgttcaaat
gatggcttctcagtcgttgctgactactttggtcgcggcgtcttcaataagctcaccctg
atcacggacttgccctcgggaaagaccgctacaacgatcgaggctggcctgcagcgggag
ctgcttatccacaccaagcgcagtacctga
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