KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457721
Entry
135457721         CDS       T09958                                 
Symbol
RBM8A
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03013  Nucleocytoplasmic transport
zle03015  mRNA surveillance pathway
zle03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    135457721 (RBM8A)
  09122 Translation
   03013 Nucleocytoplasmic transport
    135457721 (RBM8A)
   03015 mRNA surveillance pathway
    135457721 (RBM8A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zle03019]
    135457721 (RBM8A)
   03041 Spliceosome [BR:zle03041]
    135457721 (RBM8A)
Messenger RNA biogenesis [BR:zle03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     135457721 (RBM8A)
Spliceosome [BR:zle03041]
 Complex C
  Other components
   EJC/TREX
    135457721 (RBM8A)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5 Nup35_RRM_2
Other DBs
NCBI-GeneID: 135457721
NCBI-ProteinID: XP_064588509
LinkDB
Position
25:1893289..1898748
AA seq 174 aa
MADVLDLHEAGGEDFAMDEDGDESIHKLKEKAKKRKGRGFGSEEGSRARVREDYDSVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDVHDRFAEFGEIKNIHLNLDRRTGYLKGYTLVE
YETYKEAQAAMEGLNGQELMGQPVSVDWCFVRGPPKGKRRGGRRRSRSPDRRRR
NT seq 525 nt   +upstreamnt  +downstreamnt
atggcggacgtgctggatcttcatgaggcgggcggagaggatttcgctatggacgaggat
ggggacgagagcatccacaagctgaaagagaaggccaagaagcggaagggccgcggcttc
ggctcagaggaaggatcccgcgcccgggtgcgcgaagattacgacagcgtggagcaggac
ggggacgagccggggccacagagatccgtggagggctggatcctgtttgtgacaggggtg
cacgaggaggccacggaggaggacgtgcacgacagattcgctgagtttggggagatcaaa
aacatccacctgaacctggaccggcgcactggctacctcaagggttacacgctggtggag
tacgagacgtacaaggaggcgcaggcggccatggaggggctcaacgggcaggagctgatg
gggcagccggtcagcgtggactggtgcttcgtcaggggcccccccaagggcaagaggagg
ggcggccgccggcggagccgcagtccggaccggcgccgccgatga

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