Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457780
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Entry
135457780 CDS
T09958
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma isoform X1
KO
K08534
RAR-related orphan receptor gamma
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135457780 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
zle03310
]
135457780 (RORC)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
135457780 (RORC)
Nuclear receptors [BR:
zle03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
135457780 (RORC)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
GDH_HM2
Motif
Other DBs
NCBI-GeneID:
135457780
NCBI-ProteinID:
XP_064588608
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Position
25:2698186..2704569
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AA seq
487 aa
AA seq
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MPVSPCQCPRVPPAHIEVIPCKICGDKSSGVHYGVITCEGCKGFFRRSERRGPSLACHRG
QRCDIDRATRTRCQHCRLQKCLRLGMSRDAVKFGRMSKKRRDRLQAEVLEQLEKREKNRE
QNREQTRENREQNREQTRENRERPENREKGEKGEKWEKGEKWEKRDQDRAAPVPPQPPPL
GRCPPLSPAVPAGCPSRAWPAEEATRRGQDGDSAGTAGTGPVPLPGAGGVPESPAGLEIE
LLTQSVLLSHRATCHPRAEDIQGHRWATFSPEEIRAYQSQPMAAMWQRCARRVTEAIERV
VEFAKRMRGFLQLSQHDQIVLLKAGAMEVVLLRMCRAFDATTGTVLFEGKLAGPELFRSL
GCPELVASVFDFARGLSALRCSESELALLSALLLLNAGRPWLQDRPRVARLQGQIDVAFR
GLLRRTRREGILPRLPAPGRLRALCSQHLEQVQAFRRLHPAGVSAAFPPLYRELFAPDAA
DGPAGTR
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtccccatgtcagtgtccccgtgtccccccagcccacatcgaggtgattccc
tgcaagatctgcggggacaaatcctccggggtgcactacggggtcatcacctgcgagggc
tgcaagggcttcttccggcgcagcgagcggcgcgggccgagcctggcgtgtcaccgcggg
cagcgctgcgacatcgaccgcgccacccgcacgcgctgccagcactgccgcctgcagaag
tgcctgcgcctcggcatgtcccgcgacgccgtcaagttcggccgcatgtccaagaagcgg
cgggaccggctgcaggcggaggtgctggaacagctggaaaagcgggaaaagaaccgggaa
caaaaccgggaacagacccgggaaaaccgggaacaaaaccgggaacagacccgggaaaac
cgggaacggccggaaaaccgggaaaaaggggaaaaaggagaaaaatgggaaaagggggaa
aaatgggaaaagcgggatcaggaccgggcggccccggtgccaccgcagccccccccgttg
gggcgctgtcccccgctgtcccccgctgtccccgcgggctgtcccagcagggcgtggccc
gcggaggaggcgacaaggaggggacaggacggggacagcgcgggaacagcggggacaggg
ccggtgcctctgcccggtgctggcggcgtcccggagtcaccggcggggctggagatcgag
ctgctgacacagagtgtcctgctgtcccaccgtgccacgtgccacccccgtgccgaggac
atccagggccaccgctgggccaccttcagccccgaggagatccgcgcctaccagagccag
cccatggccgccatgtggcagcgctgtgcccgccgtgtcaccgaggccatcgagcgcgtg
gtggagttcgccaagcgcatgcgcggtttcctgcagctcagccagcacgaccagatcgtc
ctgctcaaggcgggtgccatggaggttgtcctgctccgcatgtgccgcgccttcgatgcc
accacgggcacggtgctgttcgagggcaaactggcggggcccgagctcttccgctcgctg
gggtgtcccgagctcgtcgcgtccgtgtttgatttcgcgcgggggctgagcgcgctgcgc
tgctccgagagcgagctggcgctgctgagcgcgctgctgctgctcaacgccggccggccg
tggctgcaggaccgcccgcgggtggcgcggctgcagggacagatcgatgtcgccttccgg
gggctgctgcgccggacccgccgcgaggggatcctgccacggctgcccgccccgggccgg
ctccgcgctctgtgctcgcagcacctggagcaggttcaggctttccgccgcctgcacccc
gcgggggtctcggccgccttcccgccgctctaccgggagctcttcgcccccgacgccgcc
gatggccccgcggggacccgctga
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