Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457834
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Entry
135457834 CDS
T09958
Symbol
F11R
Name
(RefSeq) junctional adhesion molecule A
KO
K06089
junctional adhesion molecule 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04514
Cell adhesion molecule (CAM) interaction
zle04517
IgSF CAM signaling
zle04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
135457834 (F11R)
04517 IgSF CAM signaling
135457834 (F11R)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
135457834 (F11R)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135457834 (F11R)
04090 CD molecules [BR:
zle04090
]
135457834 (F11R)
Cell adhesion molecules [BR:
zle04515
]
Immunoglobulin superfamily
CTX family
135457834 (F11R)
CD molecules [BR:
zle04090
]
Proteins
135457834 (F11R)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
ig
I-set
Ig_2
V-set
C2-set_2
Ig_6
Zwei_Ig_N
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
135457834
NCBI-ProteinID:
XP_064588684
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All DBs
Position
25:complement(2562222..2575868)
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AA seq
309 aa
AA seq
DB search
MAGAERGRHRERPRGRPREHRGHHWGPPGAGLRLLLLLGGLAALAAAQVTSEDQEVPEHK
PVELRCAAFRSSSGSARIEWKFQKGSSLTLIYYGGELTESYRDRVQFSPTSIRFGSVTRE
DSGKYICEVVGDGSHIAKSEVNLIVQVPPGKPLAHVPSSATVGARAVLRCSEAQGSPPPT
FRWYKDGTELPQDPKSSPAFRNSSYSLDPRTGELVFEPVGGWDTGDYHCEASNNVGSPQK
SDVFRMEASEVNVGGIVAAVVLLLLFLGLAAFGVWFAYRRGYFSRKKVIYSQPSRRSESE
FKQTSSFLV
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcggagcggggacggcaccgggagcggccccgggggcggccccgggagcac
cggggacaccattggggaccgcccggggcggggctgcggctgctgctgctgctcgggggg
ctcgccgcgctggccgcagcccaggtgacctcggaggaccaggaagtgccggagcacaaa
cccgtggagctgcgctgcgccgcgttccgctccagctcgggcagcgcccgcatcgagtgg
aaattccagaagggctcatccctgacactgatctactacgggggggagctcacagagtcg
taccgggaccgtgtccagttctcgcccacgtccatccgcttcggctcggtgacacgggag
gacagcggcaagtacatctgcgaggtggtgggggatggcagccacatcgccaagtccgag
gtcaacctcatcgtgcaggtgcccccggggaagccgctggcacacgtgcccagctctgcc
acggtgggtgcccgcgctgtcctgcgctgctccgaggctcagggctcgccccctcccacc
ttccgctggtacaaggacggcaccgagctgccccaggaccccaaatccagccccgccttc
cgcaactcctcctacagcctggacccgcgcacgggggagctggtgtttgagcccgtgggg
ggctgggacacgggcgattatcactgcgaggcctccaacaacgtgggcagcccccagaaa
tccgacgtcttccgcatggaggccagcgaggtgaacgtgggcggcatcgtggccgccgtg
gtgctgctgctcctgttcctggggctcgctgccttcggcgtctggttcgcctacaggcgc
ggctacttcagcaggaagaaggtgatttacagccagccctcgcggcgcagcgagagcgag
ttcaagcaaacctcctcgttcctggtgtga
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