Zonotrichia leucophrys gambelii (white-crowned sparrow): 135457861
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Entry
135457861 CDS
T09958
Symbol
ITGA10
Name
(RefSeq) integrin alpha-10 isoform X1
KO
K06586
integrin alpha 10
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04510
Focal adhesion
zle04512
ECM-receptor interaction
zle04810
Regulation of actin cytoskeleton
zle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
135457861 (ITGA10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
135457861 (ITGA10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
135457861 (ITGA10)
04810 Regulation of actin cytoskeleton
135457861 (ITGA10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135457861 (ITGA10)
Cell adhesion molecules [BR:
zle04515
]
Integrins
Integrin alpha subunits
135457861 (ITGA10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_3
Motif
Other DBs
NCBI-GeneID:
135457861
NCBI-ProteinID:
XP_064588713
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All DBs
Position
25:complement(1840653..1869632)
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AA seq
1150 aa
AA seq
DB search
MRGLLLALILLPGVAEGFNIDVGTPRVFQGPAESQFGYRVLQWGSGGDKGLLVGAPWDGD
GRGDIYRCHMGAPNSSCAKANLGAAVPWLSSSAGHLGMTLAEAEDGGLVACAPLWSQQCG
TSVFSPGRCVQLDQELQLVATMAPTAQRCSTFMDIVVLLDGSNSIYPWEEVQAFLGNVLE
RFFIGPGQTQVGVLQYGEHLVQEWALGQHPTAQSLLEAARNLTRQEGRETRTAMAIREAC
TDSFSPARGGRPGAARLLLVLTDGESHDGDELPAALAECERRNVTRYAIAVLGHYLRRQQ
DPEDFIREIKFIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTHGDNESAFELEMS
QIGFSIHHLEDGILFGMVGAHGWQGGVLEERRRGRVVPAPGAFQEEFPLQLRNHAAYLGY
SVSSLQLPGGRRLLVAGAPRFQHKGKVVLFQLDPAGTVTVAQALTGDQIGSYFGSEVLAL
DLEGDGDSELLLVAAPSYLGGQSWETGRVYVYRVGQERLSPAGSLLPEPRPQDSRFGSAL
GAVPNLSQDGLAGAVVGAPLEDGHRGALYVFHVAPGTLLPQRKQRIEAAALGWSLRYFGI
SVDGRTDMDGDGLVDVAVGAQGAAVVLRSRWILQVAAAVSVEPAAVSVTRRNCRRGGSGA
VCLRARLCFRAQSRARSAPPGMDVALRYNASLEERGPGSRAAFDSGARRLLQRRVELLLG
RQSCTRVPFHVLDTSDYLRPLSLSLTWALDEATSGSVLDEASPTSLHKLIPFFKDCGDDD
ECVTDLVLKATTDIVGSRQSPHVLRKGRRRMLVEVELENRKENAYNASLWLQLPGNLHFS
SLVLQEPSSVKLECSALGGQQRRCSVGYPVFRSQAKVSFTLELEFSCSVLRDRAELTLRA
TSDSREATPQDNVVELSVPIRYEANVFLSSATNLPRYELPPLGTFSSSPGPEFTTTLKVQ
NLGCHPLQNLTLHMALPALGPRGAPILSVTELLAANASCRLHPPSEGTPVPPEELRHSER
LDCSRSRCRGLSCSLARLGRGGGASIELRQRLHESSFGGVKFRSLRIVSSVSLGVHGGLF
VLEEGAQHRELLLELLRSRRPPVSLWVLGGSALGGLLLLALLSLGLCRLGFFSHPKPSQE
EEEEEEDEEH
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgagggggctgctcctggccctgatcctgctcccaggggtcgctgaggggttcaacatc
gacgtgggcactcccagggtgttccagggaccagcggagtcccagtttgggtaccgggtg
ctgcagtggggcagcggtggggacaaggggctgctcgtgggggccccgtgggacggcgac
ggccgaggggacatctacaggtgccacatgggagccccgaactcctcctgtgccaaggcc
aacctcggcgctgccgttccgtggctcagcagcagcgccgggcacctgggcatgaccctg
gcggaggccgaggacgggggattggtggcctgtgccccgctctggtcccagcaatgcggc
acctccgtgttcagccccggccgctgcgtccagctggaccaggagctgcagctggtggcc
accatggcgcccacggcccagcgctgctccaccttcatggacatcgtggtgctcctggac
ggctccaacagcatctacccctgggaggaggtgcaggccttcctggggaacgttctggaa
cgcttcttcattgggccggggcagacacaggtgggggtgctgcagtacggggagcacctg
gtgcaggagtgggcgctggggcagcaccccacagcccagagcctgctggaggccgcgcgg
aacctgacccggcaggagggcagggagaccaggacggccatggccatccgggaggcatgc
acggactcgttcagccccgcgcggggcgggcgcccgggggccgcgcggctgctgctggtg
ctgacggacggggagtcgcacgacggggacgagctgcccgcggcgctggccgagtgcgag
cgccgcaacgtcacccgctacgccatcgccgtgctggggcattacctgaggaggcagcag
gaccccgaggatttcatccgggagatcaagttcatcgccagcgaccccgatgagaagtat
ttcttcaacgtcacggacgaggccgccctcaacgacatcgtggatgctctgggagatcgg
atcttcagcctggagggcacccacggggacaacgagagcgccttcgagctggagatgtcc
cagatcggcttctccatccaccacctcgaggacgggatcctgtttggcatggtgggagcc
cacggctggcagggcggcgtgctggaggagcggcggcgcgggcgcgtggtgccggcccca
ggggcgttccaggaggaattcccgctgcagctgaggaaccacgcggcctacctggggtac
tcggtgtcctcgctgcagctgccgggggggcggcgcctcctggtggccggtgccccccgc
ttccagcacaagggcaaggtggtgctgttccagctggaccccgcgggcaccgtcaccgtg
gcccaggcgttaacgggggaccagatcggctcctacttcggcagcgaggtgctggccctg
gacctggagggagatggggacagcgagctgctgctggtggcagcgccctcctacctgggc
gggcagagctgggagaccgggagggtctacgtgtaccgggtgggacaggagcgcctgagc
cccgcggggtcgctgctccccgagccgaggccgcaggattcgcgcttcggctccgccctg
ggcgcggtgcccaacctgagccaggacgggctggccggagccgtggtgggcgccccgctg
gaggacgggcaccgaggggcgctctacgtgttccacgtggcaccgggcaccctcctgccc
caacgcaaacagcgcatcgaggcggcggcgctgggctggagcctccggtacttcgggatc
agcgtggacggacggacggacatggacggggacggactggtggacgtggccgtgggggcg
cagggggcggccgtggtgctgcgctcccgctggatcctgcaggtggccgcggccgtgtcg
gtggagccggcggccgtcagcgtcacccggcggaactgccggcgcggcggctccggggcc
gtgtgcctgcgcgcccgcctctgcttccgcgcccagagccgcgcccggagcgcccccccg
ggcatggatgtggctctccggtacaacgcgtccctggaggagcggggcccgggatcccga
gccgccttcgactccggtgcccgccggctgctgcagcgccgcgtggagctcctgctgggc
cggcagagctgcacccgcgtccccttccacgtcctggacacctcggattacctgcggccc
ctcagcctcagcctcacctgggcgctggatgaggccaccagcggctccgtgctggatgag
gcgtctcccacctcccttcacaaactgatcccgtttttcaaggattgcggcgatgacgac
gagtgtgtcaccgacctggtgctcaaggccaccacggacatcgtgggctccaggcagagc
ccccacgtcctgaggaagggccggaggaggatgctggtggaggtggagctggagaaccgc
aaggagaatgcctacaacgccagcctgtggctgcagctgcctgggaacctccacttctcc
agcctcgtgctccaggagcccagctcggtgaagttggagtgctcggccctgggggggcag
cagcggcgctgcagcgtggggtaccccgtgttccgctcgcaggccaaggtgtccttcacg
ctggagctggagttcagctgctccgtcctgcgggaccgcgccgagctcacgctcagggcc
accagtgacagcagggaggcgacaccgcaggacaacgtggtggagctgtcggtgcccatc
cgctacgaggccaacgtgttcctgtccagtgccaccaacctgccccgctatgagctgcca
cccctgggcaccttcagctccagccccggccccgagttcaccaccacgctcaaggtgcag
aatttggggtgccaccccctgcagaacctcaccctgcacatggccctgcccgccctgggc
ccccgcggcgcccccatcctgtctgtcaccgagctcctggctgccaatgcctcctgcagg
ctgcacccccccagcgagggcaccccggtgccccccgaggagctgcggcacagcgagagg
ctggattgctcccgcagccgctgccgggggctgagctgcagcctggccaggctgggccgg
ggcgggggcgcctccatcgagctccggcagaggctgcacgagagctccttcggcggggtg
aagttcaggagcctgaggatcgtcagcagtgtcagcctgggggtccatggggggctcttt
gtgctggaggagggggctcagcacagggagctgctgctggagctgctgcgctcgcggcgc
cccccggtgtcgctgtgggtcctggggggcagcgccctgggggggctcctgctgctggca
ctgctgagcctcggcctctgcaggctgggattcttctcccacccgaagccctcgcaggag
gaggaggaggaggaggaggatgaagagcactga
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