Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458023
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Entry
135458023 CDS
T09958
Symbol
NFASC
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
135458023 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
zle04515
]
135458023 (NFASC)
Cell adhesion molecules [BR:
zle04515
]
Immunoglobulin superfamily
L1 family
135458023 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
135458023
NCBI-ProteinID:
XP_064588981
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All DBs
Position
26:3006150..3114462
Genome browser
AA seq
1362 aa
AA seq
DB search
MIPRRAQATCAGIAFALCLQHLVSAIEVPLDPNIQSELPQPPTITKQSIKDYIVDPRDNI
FIECEAKGNPVPIFSWTRNGKFFNVAKDPKVSMRRRSGTLVIDFHSGGRPDDYEGEYQCF
ARNDYGTALSSKIHLQVSKSPLWPKEKVDVIEVDEGAPLSLQCNPPPGLPEPVIFWMSSS
MEPIPQDKRVSQGHNGDLYFSNVLAQDALTDYSCNARFHFTHTIQQKNPYTLKVKTKKSH
NETSLGNSPAMYRARGISETTPSFMYPYGTSSSQMVLRGVDLLLECIASGVPAPDIMWYK
KGGELPVGKTKLENFNKALRISNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDE
PENLILAPGEDGRLVCRANGNPKPTIQWLVNGEPIESSPPNPSREVAGDTIVFRDTQIGS
SAVYQCNASNEHGYLLANAFVSVLDVPPRILGPRNQLIRVIQNNRTRLDCPFFGSPIPTL
RWFKDGQGNTLDGGNYKAYENGSLEMFMARKEDQGLYTCVATNILGKAEAQVRLEVKDPT
RIVRGPEDQVVTKGTMLRLHCRVRHDPTLRLMVSWLKDDAPLYLGNRMKKEEDGLMIYGV
TEKDQGDYTCVANTELDKDLAKAYLTVLAIPANRLRDLPKARPDQPRDLELTDLAERSVR
LTWIPGDDNNSPITGYVVQFEEDRFQPGVWHDHSRYPGSVNSAVLSLSPYVNYQFRVIAV
NDVGSSVPSAPSERYQTNGARPEINPTGVQGAGTQKNNMEITWTPLNATQAYGPNLRYIV
RWRRRDPRGSWYNETVRSARHVVWNTPIFVPYEIKVQAENDFGRAPEPDTYIGYSGEDYP
KAAPTDVRIRVLNSTAIALTWTRVHLDTIQGQLKEYRAYFWRDSSLLKNLWVSKKRQFVS
FPGDRNRGIVSRLFPYSNYKLEMVVTNGRGDGPRSEMKEFPTPEGVPSAPRYLRIRQPNL
EIINLEWDHPEHPNGIITGYTLQYTPFNGSRMGRTVVENLSPNQTRFTLQRSDPISRYRF
RLRARTQVGEGEILMEDSPALLDEATPSPEATGPPPTPVEETSAETSAETTPETSPTISP
TTTPTTTDTTTTTTTTTTTTTSTAASTAASTSAAAERAPAATTRHELAANGSSIWDIRAM
ANSNWANITWSHNFSAGTDFVVKYITSNKTEKSIPVKAQGPSSVQLADLTPGMMYKLWVF
PIWSHPSEHSYITFTTSSAYTKNQVDIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGK
YPVRDNKDEHLNPEDKNVEDGSFDYSDEDNKPLPNSQTSLDGTIKQQESDDSLVDYGEGG
EGQFNEDGSFIGQYTVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgaggagagcccaggccacctgcgccggaattgccttcgccctctgcctccag
cacctcgtcagcgccatcgaggtccccctggacccaaatatccagagtgaattgccgcag
ccccccacgatcaccaagcaatccatcaaggattacatcgtggatcccagggataacatc
ttcatcgaatgcgaagccaaaggcaaccccgttcccatcttctcctggacgcggaacggg
aagttcttcaacgtggccaaggatcccaaggtgtccatgaggaggagatcggggactttg
gtcatcgacttccacagcgggggccggcccgatgactacgagggcgagtaccagtgcttc
gccaggaacgactacggcacggccctttccagcaaaatccacctccaggtttccaaatct
ccgctgtggcccaaggaaaaggtggatgtgatcgaggtggacgagggggccccgctgagc
ctgcagtgcaatcccccacccggcctccccgagcccgtcatcttctggatgagcagctcc
atggagccgatcccacaggacaagcgcgtgtcccagggccacaacggggacctttacttc
tccaacgtgctggcgcaggacgcgctgaccgactacagctgcaacgcccgcttccacttc
acccacaccatccagcagaagaacccttacaccctcaaggtcaaaaccaagaagtcccat
aacgaaacgtctttaggaaattcccccgccatgtaccgcgcccgagggatctcagaaacc
actcccagcttcatgtatccctacggaacttccagcagccagatggtgctccgaggggtg
gatctcctgctggaatgcatcgcctccggagtaccagcgccggacatcatgtggtacaag
aaaggcggggagctcccggtgggtaaaaccaagctggagaacttcaacaaggccctgcgc
atctccaacgtgtccgaggaggactccggggaatatttctgcctggcctccaacaagatg
ggcagcatccgccacaccatctccgtgagagtgaaggctgctccctactggctggatgag
ccggagaacctgatcctggcccccggtgaggacggcaggctcgtgtgccgggccaacggc
aaccccaaaccgaccatccagtggctggtgaacggagagcccatcgaatcgtctcccccc
aacccgagccgggaggtggccggcgacaccatcgtgttccgggacacgcagatcggcagc
agcgccgtgtaccagtgcaacgcgtccaacgagcacggctacctgctggccaacgccttc
gtcagcgtgctggatgttcctccccggatcctgggcccccggaaccagctgatcagggtg
atccagaacaacaggacgcgcctggattgtcccttttttgggtcccccatccccaccctg
cgctggtttaaggacggccaggggaacacgctggatggaggcaactacaaagcctacgag
aacgggagcttggagatgttcatggctcggaaggaggaccagggactctacacctgcgtg
gccaccaacatcctggggaaagctgaggcccaggtccgcctggaggtcaaagaccccacc
aggatcgtgaggggccccgaggaccaggtggtgacgaagggcaccatgctccggctgcac
tgccgcgtcaggcacgaccccacgctgcggctcatggtcagctggctcaaggacgatgcc
cccctgtacctggggaacaggatgaagaaggaagaggatggtctgatgatctatggagtg
actgagaaggaccagggtgattacacgtgtgtggccaacacggagctggacaaggacttg
gccaaggcctatctcaccgtgctggccatccccgctaatcggttgagagatttacccaaa
gcacgacctgaccagccccgggacttggagctgacggatctggccgagaggagcgtgcgg
ctgacgtggatccctggcgatgacaacaacagccccatcacaggctacgtggtgcagttc
gaggaggatcgcttccagcccggagtgtggcacgaccactccaggtaccccggcagcgtc
aactcggccgtgctgagcctgtcgccgtacgtgaattaccaattccgggtgatcgccgtc
aacgacgtgggcagcagcgtgcccagcgcgccctccgagcgctaccagaccaacggggca
cgtcctgaaataaatccaacaggagttcaaggggcagggacccaaaagaacaacatggag
ataacgtggacacctctgaacgcaacccaggcgtacgggcccaacctcaggtacatcgtg
cggtggcggcggcgggacccgcgcgggagctggtacaacgagacggtgcggagcgcgcgg
cacgtggtgtggaacacgcccatcttcgtcccctacgagatcaaggtgcaggctgagaac
gacttcggcagagcccccgagcccgacacctacatcggatactccggggaggattatccc
aaggctgcgcccacggatgtcaggatcagagtgttaaacagcactgccatagctctgacc
tggacccgggtgcacctggacaccatccagggacagctcaaggagtaccgagcctatttc
tggagagacagcagcttgctgaagaacctgtgggtctccaaaaaacggcagtttgtgagt
tttcctggagaccgcaaccggggcatcgtgtcccggctgttcccttacagcaactacaag
ctggagatggtggtcaccaacggccggggggacgggccccgcagcgaaatgaaggaattc
cccacccctgaaggagtgcccagcgcccccaggtacctgcggatccgacagcccaacctg
gaaatcatcaacctggagtgggatcaccccgagcaccccaacgggatcatcacgggatac
accctccaatacacaccctttaacgggtcccggatgggcaggacggtggtggagaacctg
tcccccaaccagacgaggttcaccctgcagaggtcggaccccatctcccgctaccgcttc
aggctccgcgcccgcacccaggtgggagagggagagatcctgatggaggattcaccggcg
ctgctggacgaagccacgccaagcccagaggcaactgggccgcctccaaccccagtggag
gaaaccagtgcagaaaccagtgcagaaaccactcctgaaaccagccctacaatcagccct
acaaccaccccaaccaccaccgacaccacaaccacaaccaccacaaccaccacaaccacc
accagcaccgccgccagcaccgccgccagcaccagcgccgctgccgagagggctccggca
gccaccaccaggcacgagttggccgccaatggatcgtccatatgggacatcagagccatg
gcaaacagtaactgggcaaacatcacctggagccacaatttctcggcaggaactgacttt
gtggttaagtatatcaccagtaacaagacagagaaatcaatccccgttaaggctcagggc
ccgtcctcggtgcagctggcggatctgacgccggggatgatgtacaagctgtgggtattc
cccatatggtcccaccccagcgagcactcgtacattacctttaccaccagctcagcctac
accaagaaccaggtggacatcgccacgcagggctggttcatcggcctcatgtgcgccatc
gccctcctggtgctcatcctcctcatcgtctgcttcatcaagaggagccgcggcgggaag
tatccagtgcgggacaacaaggacgagcacctcaatcccgaggacaagaacgtggaggac
ggatccttcgactacagcgatgaagacaacaaacctcttcccaacagccagacctcgctg
gacgggacgataaagcagcaggagagcgacgacagcttggtggactacggcgaagggggc
gagggccagttcaacgaggacggctccttcatcggccagtacacggtcaagaaggacaaa
gaggagaccgagggcaacgagagctccgaggccacgtcccccgtcaatgccatttattcc
ttggcatag
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