Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458202
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Entry
135458202 CDS
T09958
Symbol
IRF6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135458202 (IRF6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zle04147
]
135458202 (IRF6)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
135458202 (IRF6)
Exosome [BR:
zle04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
135458202 (IRF6)
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Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
135458202
NCBI-ProteinID:
XP_064589271
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Position
26:608437..616902
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AA seq
460 aa
AA seq
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MALHPRRVRLKPWLVAQVDSGMYPGLIWLNREAKRFQIPWKHATRHSPQHEEENTIFKAW
AVETGKYQEGVDEPDPAKWKAQLRCALNKSREFNLMYDGTKEVPMNPIKIYEVCDIPQSQ
GSIINPGSTGSAPWDEKDNDLDDEEEEELNQSQHVPIQETFPFLNINDSPMAPASAENCS
SETVWPKNEPLDMEMPPTALQHDFFSSPELWISSLPMTDLEIKFEYRGKETGPTTTVSNP
QGCRLFYGELGPMPDQEELFGPISLEQVKFPGTEQITNERQKIFTSRLLDVMDRGLILEV
SGHAIYAVRLCQCKVYWSGPCAPSSTTPNLIERQKKVKLFCLETFLSELIAHQKGQIEKQ
PPYEIYFCFGEEWPDGKPRERKLIVVQVIPVVARMIYEMFSGDFTRSFDSGSVRLQISTP
DIKDNIVAHLKQLYRLLQNHQEGWPMQAPAMHMAQPLPAQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccctgcacccgcgcagggtgcggctgaagccgtggctggtggcccaggtggacagt
ggcatgtaccccgggctgatctggctgaaccgcgaggccaagcgcttccagatcccctgg
aagcacgcgacgcggcacagcccccagcacgaggaggagaacaccatcttcaaggcatgg
gctgtggaaacgggaaagtaccaggaaggagtggacgagccagaccctgcaaagtggaaa
gcccagctgcgatgtgcactcaacaagagccgggagtttaatttgatgtacgatggcacc
aaggaggtgcccatgaacccgattaaaatttatgaagtgtgcgacatcccgcagtcgcag
ggatcaatcattaatccaggttccactggctcagctccgtgggatgaaaaggataatgat
cttgatgatgaagaggaggaagaattgaatcaatctcagcatgtcccaattcaagagacg
tttccatttctcaatatcaatgattctccgatggctccagccagtgcagaaaactgcagc
tctgaaactgtgtggccaaagaatgaacctctggatatggaaatgcccccaacagcactg
cagcacgacttcttcagcagccccgagctctggatcagctccctgccaatgacagacctg
gaaatcaagtttgagtatcgaggaaaggagaccgggcccacaacgaccgtgagcaacccg
cagggctgcagactgttctatggagagctgggccctatgccagaccaggaggagctcttt
gggcccatcagcttggagcaagtcaagttcccagggacggagcagatcaccaacgagagg
cagaagatcttcacgagccggctgctggatgtaatggacaggggactgatcctggaggtc
agcggccatgccatctacgccgtgcgcctctgccagtgcaaggtgtactggtctgggccc
tgtgccccctcctccaccaccccaaacctcatcgagaggcaaaagaaggtcaagctcttc
tgtctggaaaccttcctaagcgagctgattgcccatcagaagggacagattgagaaacag
ccaccatacgagatctacttctgctttggagaagagtggcccgatggaaaacccagggag
aggaagctgattgtggtgcaggtgatccccgttgtggcgcggatgatctacgagatgttc
tccggggacttcacgcgctccttcgacagcggcagcgtgcggctgcagatctccacgccc
gacatcaaggacaacatcgtggcacacctgaagcagctctaccgcctgctgcagaaccac
caggagggctggcccatgcaggccccggccatgcacatggcacagccgctcccagcacag
tga
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