Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458435
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Entry
135458435 CDS
T09958
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
zle03037
]
135458435 (CFAP54)
Cilium and associated proteins [BR:
zle03037
]
Motile cilia and associated proteins
Sperm associated proteins
135458435 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
Ribonucleas_3_3
Motif
Other DBs
NCBI-GeneID:
135458435
NCBI-ProteinID:
XP_064589662
LinkDB
All DBs
Position
1A:33881071..33983231
Genome browser
AA seq
3132 aa
AA seq
DB search
MAQPAGPQAPHAAFFGPVARGNPVVDSFEAELRRVLSSLRRLRGAGEAKPPQHDLHRHGA
NTLFDIWIKYKPRLPEWYYNERLVKVGDTLAQIKEYKLALQQCYERYLQQFVSVNLDDVM
DDVQRFKSAFFPNGVRDKNAAVMFHVLQARNVCIYHVVCSRDRNLWHGESLQTCLNVLTS
LRLTMQVALPQEDLCWLIYNGTIHIYTICRHLMVMGHSAKVLEYLLWASICMESSIPLLS
VHYLTWRATLYTAVSQCYFDCQASIHGEIFARRGLIKIDELKQLEDISSSLGQTEREKIF
REATLKMSVMIFKRAVYESRKKSNSFRRESKVNPRKAVNVSWPRTATERLLVAMFDGAAA
QFLAILEALPDRSRNLLPPHPPVPDEVQIPEVTSELFSAGLEILSGGASSGTNHFGIINP
SSSLLQLMLAGEERVSGDAAVKFVKLAFNYEEWNVFYSAFEFVDNFLQAQDDPTWKKAEL
ELKLLTLMQPVVLPGRFEPSFSINEGGKSKEGSTRRGSEKTKTIRKESLKPGDPFRDLMI
LAKTTFSYVSTFEQNVHPGKEILVDVVMCLWQKCKTELQQIQKSGSHCLEYMHKHQAYEW
VHILWIMNEIIEKSNIAETNVMFAEITLCLAAILENVADSTSESKDKQGGSTSLSQDETC
DMPEILMKTPTEQLQIAYEVLEKAINDMNTSRLTTILPDGKSVFDSCCTKVDSNDQNLNS
VLGCGDDKTGTDNGFLADLHLELIQAQHRVAVKLLKITQGAQVVHRIPKPSKSQDKNIED
FQYLSEELIMKKIKRNKLSRAIFLMQKAAQKFPEDLSTTSQRQLLEEALTLIEQVEAEQS
ALYRSLKEAMSSRKKSRTPPPPLLLSRSHCSMTFKPAPFDSDIQVSWYCILGCVAGGSNT
KVRLNSNKLQNSGEQILADGKILFEVQGLDANEKYIFAVAAYSSDGKLIGDAIGQMTKPI
LAYPPLSATTVRAYLTQVAYQMGNFRLARAAFSPMWDYFVSDSSPQPPNAAVISASSNFT
ISAKRLHFEAVSQTSPIALHLFLRNIFAVSDINVMEGALFCDSICSNEIFYKEQVARLAE
CERMTVAIELSNWLNDPSYALQSVVQCYGLLAPLIYHKIFSVPVVQILIKCLAVLQEIPS
STLQRRQEECYESILHMIACASYHTAKVLHSWKEYELSAIIINYGKKLLISPGVSPGQSG
DVKTEETRTGKARRSSRASHLAAMAKAAENLNSLESTLLKLTEPGPGAQLTGKESLLLLY
PVISCWPSDRAYREVLKFKGNTRFLEFFVQLLHKVMNEEKFQSVLEWAESVETNLKRRNE
SFLGTDGIAAQARSLTLGESTSAAEVQKGKNTSPSGKAKASPAKKPTKQAVPQKGPLREF
LMKNPDTMQSSEAQNKAMDKLKKLAHETLVMLLTKYVIRSRFCQMCLEEMPWKSQMNIYL
ALAHYHLFKKNLEVQYNMGISGSQHLDSYNILDPEIFSLNNSGTVLAREAADDNIGKPSP
SLPEKSEDTETQTSTGKSPKTRNKQSQTPRSRTKTNKQDQVPSNALLLKHFTSIFLHLKR
AVVLAHRGGHWTLLQNACRDLWSYTQEFQVIANQSRSHMGAFSITWDLLCSTIWLPFYFA
SDMIIDMIIDLQASSSLKIVDPEGEFCIPSCLGGIADENGGSALHPQPPMDDVNVVDLRW
ICNLVLKTIELLYHMKKWEALVHIAVRFNIFTHERFTEQVSPLLVYAQRQLLERIQQFSG
SDSHGSHFTKYLSDDAQKMRCRNYIGYKLQLPVARSASEGVFPGRFFNPPTNKDSTDHNQ
AKALVSVPLDVNDTLKCFKETLEKSKYQSRALRHSRKLLSLFLAHTQENTGRAISSHISS
SRKLKFSVVDEVIFLPTPCDLSQEKYNFSSMVEGRPIPKSHLSVITSSYEKTIGILEMSS
QRDLKVQALHELGNLHFYAGNKRAAFKYWCQSLDETLNIADALNTWQELYFPKDATDCFA
VGRSTDMSEKFLSQAGAWGCLHAAVLVAKIAQYITTSNIRLRTKYCYFSAILFKTLFRAS
LPHPTSDCDFAQYETNILIPGIDLFSDRYRADISTVVASLNFIMLELHSVKQNLIILPLF
TLYQYIVSELCKDPAKCIEGRILKIKALTDIGFFTGAFHELSLLISGERIPWKIPAGYRC
TGPVQASQKFDTSKSLMTDTNLQVLEDTFNWSLSLTVAPLCNPQMMNKLTLAKMHLIICL
SATINNIPEKVEKDLYFVDNDNLPEPSKTTASNVKVDADQDPRQQEQRDRVVRLVGCKDK
LNMAMLKGILLTEAEGTLGRLVQNIQEKYDGDISRYSVEDLEALIEARLELASISHQRHQ
APLSVALAFSAIRLLQDAKVFCVDVAHFQEEKDEREHLESTTEGVSLPPRVTAQGHVNVH
LWLRCRAMLVTALMAQIHGIGDKKGNDVAERRSVIKEAILEAEAFGDTETQAEMMVQAAI
LDLQEKRPVAGIKLLLQNIIGLLQEDTCISLPASVTFVKSMLLLADILPLQLVEDSEHCS
SPVEPFNLLVLAHKLTIKAIFDCGELIERQGEDSTLTCLVLPLKNIYLPHINLLALVKMK
IGYTLAERVASTAARLPLQWLHALRHLESALNLCRAAAAKKADLEVELLFQMGKVKRQTR
ETGSKLTQAVETLFEAIKLSQQHDQKYELVRRSYLEIALSYFRFAETNEDESDTDNSVTS
KYSTYSEDRASEDAMKSEAYKAQAWIAIRAASQVSEAMLASRLLIGIKSVKDENVKDEVQ
QKIPEFATMDLFSSYRDFISDGYNVVSETPEVSSAENKEITEDYQSDSEGTESPVTKASQ
KKDTITWILMIRYHNHLKRMYNTNLSGTGSLSGRDGHLGLISDTGIVLRIAKMHSFLEKY
LLQFSVCCPENFPAELHDVEIPLSHSSDSSEMSIDISETMSLVSQARPASTVSAVPEYEK
TESRATVAPDREINIQWYIPPMAKESNDRKTKVLLLYAYNTSPIRISDISSVSMFSGHFW
IPLARIISLREKLSDLKEQIELSMQAAKSFSTSEHTSLPEQNETLKIIPPFQPKRSDAKV
HLDGKIEEMAKRCLSEVKALLSVDPALSPPLTEIPFDVTLQSITSLKDMFDLANGCIIRD
GSLFNWMISLLR
NT seq
9399 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcccgccgggccgcaggccccacacgccgctttcttcgggcccgtggcgcgg
ggcaacccggtggtggacagcttcgaggccgagctgcggcgcgtcctgagctccctgcgg
cggctgcgaggcgcgggggaggccaagccgccgcagcacgacctgcaccgccacggagca
aatactttgtttgacatttggatcaaatacaagccacgactaccagagtggtattacaat
gaaagacttgtgaaagttggtgatacccttgctcagatcaaagaatataagctggcactt
caacagtgttatgaaagataccttcaacagtttgtttctgtaaaccttgacgatgtcatg
gatgatgtgcagcgctttaaatctgccttttttccaaatggtgtcagagacaaaaacgca
gcagttatgttccatgttttgcaagcaagaaatgtttgcatttatcatgtggtttgcagc
agagacagaaatctttggcatggagagtccctgcagacttgtctcaatgtcttgacctca
ttacgactcactatgcaagtggctctacctcaggaggatttgtgttggcttatctacaat
ggtactatccatatttacaccatatgcagacatttgatggtgatgggtcattctgctaag
gtcctggaatacttactgtgggccagtatatgtatggaatcatccattccactcttatct
gtgcattatttgacgtggagagccaccctatatacggcagtttctcagtgttattttgat
tgtcaagccagcattcatggagagatatttgctcgccgtggtttgattaagattgacgaa
ctgaagcaattagaagatatcagttcttctctgggacaaacagagagagaaaagattttt
agagaggccactctaaagatgtcagtaatgattttcaagagagcagtatatgaatctaga
aaaaagtcaaacagctttcgacgtgagtcaaaagttaacccgagaaaagcagtaaatgtg
tcatggcctcgcaccgctaccgagcggctgctggtggcaatgtttgatggtgctgcagct
cagttccttgccatcctggaagcactgcccgatcgtagcaggaatctattgccccctcat
cctcctgttcctgatgaagtgcaaattcctgaggtcacttctgagcttttttctgcaggc
ctagaaatcctctcaggtggagcgagcagtggcaccaatcactttggtataattaatcca
tcatctagtcttctgcagttgatgctagcaggagaagaaagggtgtctggagatgctgct
gtgaaatttgtaaaattagctttcaactatgaagagtggaacgtgttttattctgctttt
gaatttgttgataattttcttcaggctcaagatgacccaacatggaagaaagctgaactg
gaactcaaacttcttacactcatgcaacctgtagtactcccaggaagatttgaacctagt
ttttctattaatgagggtggtaagagcaaagaaggcagcacacgtcggggttctgaaaag
acaaagacaattagaaaggaatccttaaagcctggagatccttttcgtgatcttatgatt
ttggcaaaaacaacgttttcctatgtctccacatttgagcagaatgtccatcctggcaaa
gaaatacttgttgatgtagtaatgtgtttgtggcagaagtgcaaaacagaacttcagcaa
atccaaaagagtggaagtcactgcttagaatatatgcacaaacaccaagcttacgaatgg
gttcatatactctggataatgaatgaaataattgagaagagcaacatagcagagactaat
gtaatgtttgcagagataactttatgtctagctgcaatactggaaaatgtagctgattct
acaagtgaatctaaggacaaacaaggaggaagtacttctctttcacaagatgagacctgt
gatatgcctgaaatactgatgaaaacgcctacagaacaattacagattgcttatgaagtt
cttgaaaaagcaattaatgacatgaacacatctcggttaacgaccattttaccagatgga
aagtcggtatttgacagctgctgtacaaaggtggactcaaatgatcagaatttgaattct
gttttgggatgtggtgatgataaaacaggaacagataatggttttttggcagatttacac
ttggagctcattcaggcccaacatcgagtagctgtgaaacttcttaaaattacacaaggt
gctcaagttgttcacagaattcctaagcctagtaaatctcaggacaagaatattgaagat
ttccaatatttatcagaggaacttataatgaaaaaaattaaaaggaataaactatccaga
gcaatctttttgatgcaaaaggctgcacagaagttccctgaagacttaagtactacttcc
caaaggcagctactggaggaagcactaactttaattgagcaagttgaagctgaacaaagt
gcattgtatcgcagtctcaaagaagctatgagcagcaggaaaaaaagcaggactcctcct
cctcctctgttactttccagatcacattgttccatgacatttaaaccagccccatttgat
tcggatattcaggtttcatggtactgtattttgggctgtgtagcaggaggaagtaatacg
aaagtaaggttaaatagtaataaacttcagaattcaggagaacagatactggcggatggg
aaaattctcttcgaagtccaagggttagatgccaatgagaaatacatatttgctgtggca
gcatattcttcagatggaaaacttattggggatgccattgggcaaatgactaagccaatt
cttgcctatccaccactttctgctactactgttcgagcatatctaactcaggtagcctat
cagatgggcaacttcagattagccagagcagcattttcaccaatgtgggattactttgtt
tcagattcttctccacagcctcccaatgcagctgtaatttctgcaagtagtaatttcact
atatctgcaaaaaggttacattttgaagctgtatctcagacttctcctattgccttgcac
ctctttttgaggaatatatttgctgtttctgacattaatgtcatggaaggtgcactcttc
tgtgattccatctgttccaatgagatattttataaggagcaagtagctagattagcagaa
tgtgaaagaatgacagtggcaattgaacttagcaactggttgaacgatccaagttatgca
ctgcagtctgttgtacaatgttatggtctcctcgccccacttatttaccacaagattttt
tcagtgccagtagttcagattctcattaaatgcttggctgtcctccaagaaattccaagt
tctactttgcaaaggagacaggaagaatgttatgagagtattctgcatatgatagcttgt
gcttcatatcatacagcaaaggtactacattcatggaaagagtatgaactttcagcaatt
atcattaactatgggaaaaaattgttgatctcaccaggagtttcacctggccagtcagga
gacgtgaaaactgaagaaacacgcactggcaaagcaagacgttcctcaagggcatcccat
ttagctgcaatggcaaaagcagcagaaaatctaaattctcttgaatcaactctactcaaa
ctgacagaaccaggtcctggagcacagcttacaggaaaggaatctctgttgctactctac
cctgtaatttcatgttggccatcagaccgtgcttatcgagaagtgcttaaattcaaaggc
aacacacgtttccttgagttcttcgttcagcttttgcacaaagtcatgaatgaagagaag
tttcagagtgttctggagtgggcagagagtgtggaaactaacttgaaaaggaggaatgag
agcttccttggtactgatggaattgcagcacaagcaaggtctctcactctgggagaaagc
acaagtgctgcagaagttcagaagggaaaaaatacctcaccttcagggaaagcaaaggca
tcacctgcaaagaaaccaacaaaacaagctgtgcctcagaaaggacctctcagagagttt
ttaatgaaaaatccagatacaatgcaatcttcagaagcacaaaacaaagccatggataag
ttgaagaaattggctcatgaaaccttagtgatgctgctgactaaatacgtaatccgaagt
cgcttttgtcaaatgtgtcttgaagagatgccctggaagtctcagatgaatatctatctg
gcccttgcacactaccatctatttaaaaagaacctggaagtgcaatacaatatgggaatt
agtggttcacagcatctggacagttacaatattttggatcctgagatattctcattaaac
aattctggcactgtattggcaagggaagctgcagatgataacataggaaaaccaagtcct
tctctccctgaaaagtcagaagacactgaaacccaaacctccacaggtaaatctcctaaa
accagaaataaacagagtcaaactcctcgaagtcgaacaaagaccaacaaacaggaccag
gttccatcaaatgcccttttactgaagcattttacaagcatcttcttgcatttgaaaaga
gcagtggttcttgctcatcgtggtggccactggacattgcttcaaaatgcttgtcgagat
ctttggagctatactcaagaatttcaagtgattgctaaccagtcacgttcccatatgggt
gcattttccatcacctgggatcttctttgcagcaccatctggttgccattttattttgca
tcagacatgatcattgatatgataattgacctacaagctagcagttctcttaagattgtg
gatcccgaaggagagttttgcattcccagttgtttaggaggcattgcggatgagaatggt
ggttctgctcttcacccccagcctcccatggatgatgtgaatgtggttgatctgagatgg
atatgcaatctggttctaaaaacaatagaattgttgtatcacatgaagaagtgggaagca
ctggtgcacatagctgtacgatttaacatatttacacatgagaggttcacagaacaagtg
agtccactcctggtgtatgctcagaggcagctgctggagaggatacagcagttcagtggc
tcagacagccatggatctcatttcacaaaatatctgtctgatgatgcacaaaagatgaga
tgcagaaactacatagggtacaaattacagctgcctgttgctcgttctgccagtgaaggg
gtttttcctggacgctttttcaatcctccaacaaataaggattctacagatcacaatcaa
gcaaaagccctagtttctgtgcctcttgatgtgaatgatacactgaaatgttttaaagaa
actctagaaaaatctaaatatcaaagcagagcactgagacacagcaggaaactactttca
ttatttcttgcgcacacacaagaaaatactggaagagcaatcagcagtcatatctcttca
agcaggaagctgaaatttagcgtggtagatgaagtgatatttctaccgacaccgtgtgac
ctttctcaagaaaaatataatttctccagtatggttgagggtagaccaataccaaagtcg
cacctttcagtaattacgtcttcctatgaaaaaacaataggaatccttgaaatgagtagc
cagagagacctcaaggtacaggctctacatgaacttggaaatcttcacttttatgctgga
aataaaagagctgcttttaaatactggtgtcaatcccttgatgaaacactcaacattgct
gatgctcttaacacctggcaagagttatattttccaaaagatgctacagactgctttgca
gttggaagatcaactgatatgagtgagaaatttctttctcaggctggagcttggggatgt
ttacatgcagcagtcctagtggctaagatagctcagtatataacaacatcaaatataaga
ttaagaacaaaatactgctatttttctgcaatactttttaagaccttgtttagagcttct
cttccccatccaacatctgactgtgactttgcacaatatgaaacaaatattcttattcct
ggtattgaccttttctctgatcgctacagagctgatatctctactgtagttgcaagtctg
aatttcattatgcttgaactacattctgtgaagcaaaatttaataattttacctctgttc
acattataccagtatattgtatctgagctttgtaaggacccagctaaatgtattgaagga
agaatcctcaagattaaagcacttacagatataggattttttacgggggcctttcatgag
ctgtctttgcttatttcgggagagagaattccatggaaaataccagcaggatacagatgt
actggaccagtgcaggcctcacagaaatttgatacctcaaaatctctcatgactgataca
aatttgcaggtactggaagatacatttaattggagcctgtctttaacagtggcgccactg
tgcaacccacaaatgatgaacaaattaaccttagccaaaatgcatctcatcatttgtctt
tctgccacaataaataatatacctgaaaaagttgaaaaagatttatattttgttgacaac
gacaacttgccagagccaagcaaaactacagcatcaaatgtaaaagttgatgctgatcag
gatccaagacaacaggaacaaagagacagagtggtgcgtcttgttggctgtaaagataaa
ttaaatatggccatgctgaaggggattttattgacagaagctgaaggaactctaggccgt
cttgtacagaacatacaggaaaaatatgatggggacatatctcggtattctgtggaagat
ttagaggctctcattgaggccagacttgagcttgcttctatttctcatcaaaggcatcaa
gcgcctctcagtgttgctttggctttttctgcaattcgacttctccaagatgccaaagtt
ttttgcgtggatgtggcacattttcaagaggaaaaggatgaaagggagcatttggagtcc
accacagaaggtgtttcactccctcctcgtgtaacagcacaaggacacgtgaacgtacat
ttgtggctgaggtgtcgggcaatgttagtgactgcactcatggcacagatacatggtatt
ggtgataagaaaggaaatgatgtggctgagcggagaagtgtgataaaagaagcaatatta
gaggcagaagcctttggtgatactgagactcaggctgaaatgatggtgcaagctgctatt
cttgacctgcaagaaaaacgtcctgtggcaggcattaaacttcttttgcagaatatcatc
ggtttactccaagaggatacatgtatttccctgccagcttctgtgacttttgtgaaaagc
atgcttctgctggcagacatactgccactgcaactagtagaggactcagaacattgctct
tctccagtggaaccatttaacttgcttgttttagcacataagcttaccattaaagcaatt
tttgattgtggtgaactcattgaacggcaaggagaagacagtacattgacttgcctggtc
ctacccttgaagaatatctacctgccacatattaacttgctagccctggtcaaaatgaaa
attggatacacattagctgaaagagtagcttccacagctgcaagacttcccttgcaatgg
ctacatgctctcaggcatttagaatcagcattgaatctttgcagagcagctgcagcaaaa
aaagcagatttggaagttgaacttctttttcagatgggtaaggtaaaacgccaaacaaga
gaaacaggcagtaagttaactcaagctgttgaaaccctgtttgaagctattaagctcagc
cagcaacatgatcaaaaatatgagttagtaagacggtcataccttgaaatagcactatcc
tatttccgttttgctgaaacgaatgaggatgaatcagacacagataattcggtgacttcc
aaatacagtacctattctgaagatcgggcttctgaggacgctatgaaatcagaagcgtac
aaagcacaagcctggattgcaataagagcagcttcacaggtcagtgaagctatgcttgct
tctcggctgttaattggaatcaagagtgttaaagacgagaacgtgaaggatgaagtacaa
caaaaaatcccagaatttgctactatggatcttttttcttcctacagagatttcatatct
gatggatacaatgttgtctctgaaactcccgaagtatcttctgctgaaaacaaagaaatc
acagaagactatcagagtgacagtgaaggaacagaaagtcctgtcaccaaggccagccag
aagaaagatacaataacatggattctcatgattcgctaccacaatcatttgaagagaatg
tataacacaaacctatctggaactggatcactttctggaagagatggacaccttggtttg
atttctgacacaggaattgtcctacgcatagcaaaaatgcattccttccttgaaaagtat
ttgttgcaattttcagtgtgttgtcctgagaattttccagcagaactacatgatgtagaa
ataccactcagtcattcaagtgattcttcagagatgtctattgatatttctgaaactatg
tcattagtttctcaggcaagaccagcttctacggtttctgccgttccagaatatgagaag
acagagagtagggcaacagttgctccagatagggaaatcaacattcagtggtacattcct
cctatggcaaaggaatcaaacgacagaaaaactaaggttttgttgctttatgcttataat
acaagtcctatcaggattagtgacatcagttcagtgtctatgttttcaggccacttttgg
attccattggctagaattatttctttaagggagaaattgtctgatctgaaggagcaaatt
gaattatcgatgcaagctgctaagagcttttcaacttcagaacatacaagtttacctgag
caaaatgaaactttgaaaataattcctccatttcaacccaagagaagtgatgcaaaagtg
catctcgatggtaaaatagaagaaatggctaaaaggtgtttatctgaagtcaaagcactg
ctttctgttgatccagccctgtcccctccattaactgagatcccatttgatgttactttg
caatcaataacaagtttgaaagatatgtttgatcttgccaatggatgtataatacgtgat
ggaagtcttttcaattggatgatttctctgcttcgctaa
DBGET
integrated database retrieval system
